RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CUZD1Q86UP6 607 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 TMEM192Q8IY95 271 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 OR8H2Q8N162 312 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 YIPF7Q8N8F6 280 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 ZBTB44Q8NCP5 570 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 TRNT1Q96Q11 434 aaKnown RBP8.65□□□□□ -1.03
VAPB-201ENST00000265619 KCNS3Q9BQ31 491 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 ADPGKQ9BRR6 497 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 MINDY3Q9H8M7 445 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 POLMQ9NP87 494 aaPredicted RBP8.65□□□□□ -1.03
VAPB-201ENST00000265619 ACOT13Q9NPJ3 140 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 FAM49BQ9NUQ9 324 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 NRCAMQ92823 1304 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 SLCO1B7G3V0H7 640 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 I3L521 148 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 PRPSAP2O60256 369 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 MLYCDO95822 493 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 POLBP06746 335 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ADORA3P0DMS8 318 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 MAP3K7CLP57077 242 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 MAPRE2Q15555 327 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 TAF12Q16514 161 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 AAK1Q2M2I8 961 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ABI3BPQ7Z7G0 1075 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 DENND6AQ8IWF6 608 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 AFAP1L2Q8N4X5 818 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 LHFPL5Q8TAF8 219 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ZFAND1Q8TCF1 268 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 OSMRQ99650 979 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 TINF2Q9BSI4 451 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 C1QTNF6Q9BXI9 259 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ERAP1Q9NZ08 941 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 MAFBQ9Y5Q3 323 aaPredicted RBP8.64□□□□□ -1.03
VAPB-201ENST00000265619 A0A1B0GTL3 188 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 TYW5A2RUC4 315 aaKnown RBP8.64□□□□□ -1.03
VAPB-201ENST00000265619 HMX3A6NHT5 357 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 LRRC14BA6NHZ5 514 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 C2CD4BA6NLJ0 364 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 E5RI56 91 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 M0R082 166 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 HS6ST1O60243 411 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 RECQL5O94762 991 aaPredicted RBP8.64□□□□□ -1.03
VAPB-201ENST00000265619 ANGPTL1O95841 491 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ASS1P00966 412 aaKnown RBP8.64□□□□□ -1.03
VAPB-201ENST00000265619 CXCL8P10145 99 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ELNP15502 786 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 NMBRP28336 390 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 DIO3P55073 304 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 SLC35A2P78381 396 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 PLIN5Q00G26 463 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 CRHR2Q13324 411 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 SIM2Q14190 667 aaPredicted RBP8.64□□□□□ -1.03
VAPB-201ENST00000265619 GNA13Q14344 377 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ZNF484Q5JVG2 852 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 CLVS2Q5SYC1 327 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 ZNF691Q5VV52 312 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 SULT1C3Q6IMI6 304 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 SPESP1Q6UW49 350 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 MICU2Q8IYU8 434 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 SH3RF2Q8TEC5 729 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 HEXDCQ8WVB3 486 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 KCNA7Q96RP8 456 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 TRIM15Q9C019 465 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 OR51E2Q9H255 320 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 NUP50Q9UKX7 468 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 KIAA0100Q14667 2235 aaKnown RBP8.64□□□□□ -1.03
VAPB-201ENST00000265619 LAMA3Q16787 3333 aa8.64□□□□□ -1.03
VAPB-201ENST00000265619 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 G3V2T6 193 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 SNAI1O95863 264 aaPredicted RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 TGM4P49221 684 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 ZNF143P52747 638 aaPredicted RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 CDH13P55290 713 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 SNRPFP62306 86 aaKnown RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 CTBP1Q13363 440 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 DOC2BQ14184 412 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 PLEKHM3Q6ZWE6 761 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 TMC8Q8IU68 726 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 MINDY1Q8N5J2 469 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 UBASH3BQ8TF42 649 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 ROPN1LQ96C74 230 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 GIMAP5Q96F15 307 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 MMP27Q9H306 513 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 KAT8Q9H7Z6 458 aaKnown RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 SCPEP1Q9HB40 452 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 FLRT1Q9NZU1 646 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 KLK14Q9P0G3 267 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 MORF4L1Q9UBU8 362 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 BTBD3Q9Y2F9 522 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 RLFQ13129 1914 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 NUPL2O15504 423 aaKnown RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 TBC1D4O60343 1298 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 STBD1O95210 358 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 FHP07954 510 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 CCNYL3P0C7X3 344 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 FCGR1AP12314 374 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 ASPAP45381 313 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 SLC15A1P46059 708 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 RGS7P49802 495 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms