RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ACRP10323 421 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 AMD1P17707 334 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 RPL26P61254 145 aaKnown RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 DCAF4L2Q8NA75 395 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 MRGPRX2Q96LB1 330 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 CDK15Q96Q40 435 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 SMAD5Q99717 465 aaKnown RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 C3orf14Q9HBI5 128 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 PLGRKTQ9HBL7 147 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 ZIM2Q9NZV7 527 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 NDOR1Q9UHB4 597 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 ERGIC3Q9Y282 383 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 FAM25AB3EWG3 89 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 FAM25CB3EWG5 89 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 FAM25GB3EWG6 89 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 CXCR6O00574 342 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 LEPRP48357 1165 aaKnown RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 TCEA2Q15560 299 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 CHRNA6Q15825 494 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 MORN1Q5T089 497 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 GALNT18Q6P9A2 607 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 LRRC58Q96CX6 371 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 RNFT2Q96EX2 444 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 AHCYL2Q96HN2 611 aaKnown RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 MYOCQ99972 504 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 CDK9P50750 372 aaKnown RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 ZNF544Q6NX49 715 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 ANKRD46Q86W74 232 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 ARMC8Q8IUR7 673 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 EEF1AKMT1Q8WVE0 214 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 PLEKHG4BQ96PX9 1271 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 MAGEB17A8MXT2 336 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 SOD2P04179 222 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 CCDC159P0C7I6 412 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 SEMG2Q02383 582 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 PDZK1Q5T2W1 519 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 DEF8Q6ZN54 512 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 CYP2U1Q7Z449 544 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 HID1Q8IV36 788 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 NSMCE3Q96MG7 304 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 CHID1Q9BWS9 393 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 TRIT1Q9H3H1 467 aaKnown RBP16.46■□□□□ 0.23
PHRF1-201ENST00000264555 CIDEBQ9UHD4 219 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 EME2A4GXA9 379 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-201ENST00000264555 DDX6P26196 483 aaKnown RBP eCLIP16.46■□□□□ 0.231e-7■■□□□ 11.7
PHRF1-201ENST00000264555 PSRC1Q6PGN9 363 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-201ENST00000264555 BRAT1Q6PJG6 821 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 C2orf73Q8N5S3 287 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-201ENST00000264555 EBPLQ9BY08 206 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 ELAC1Q9H777 363 aaKnown RBP16.46■□□□□ 0.23
PHRF1-201ENST00000264555 A0A0D9SEW6 157 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 RNASEH2AO75792 299 aaKnown RBP16.46■□□□□ 0.23
PHRF1-201ENST00000264555 CBSLP0DN79 551 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 CBSP35520 551 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 NIPAL4Q0D2K0 466 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 UBXN11Q5T124 520 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 OR52L1Q8NGH7 329 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 PGAP3Q96FM1 320 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-201ENST00000264555 GSTK1Q9Y2Q3 226 aa16.46■□□□□ 0.23
PHRF1-201ENST00000264555 GSAPA4D1B5 854 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 AP3D1O14617 1153 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 NBNO60934 754 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 CYP11A1P05108 521 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 SLC10A3P09131 477 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 RAP2AP10114 183 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 BUD31P41223 144 aaPredicted RBP16.46■□□□□ 0.22
PHRF1-201ENST00000264555 MTPNP58546 118 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 NFKB2Q00653 900 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 MAPK11Q15759 364 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 LRRC73Q5JTD7 316 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 KBTBD8Q8NFY9 601 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 SLC22A17Q8WUG5 538 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 ZNF514Q96K75 400 aaPredicted RBP16.46■□□□□ 0.22
PHRF1-201ENST00000264555 INSL5Q9Y5Q6 135 aa16.46■□□□□ 0.22
PHRF1-201ENST00000264555 PCCBP05166 539 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 ALOX12P18054 663 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 MYLK3Q32MK0 819 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 ZNF513Q8N8E2 541 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-201ENST00000264555 RAD51AP1Q96B01 352 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 PRICKLE1Q96MT3 831 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-201ENST00000264555 ADI1Q9BV57 179 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 GULP1Q9UBP9 304 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 PPM1HQ9ULR3 514 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 MYADML2A6NDP7 307 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 BCKDKO14874 412 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 COPZ1P61923 177 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 FOXM1Q08050 763 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 ITGADQ13349 1161 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 SF1Q15637 639 aaKnown RBP16.45■□□□□ 0.22
PHRF1-201ENST00000264555 ZNF678Q5SXM1 525 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 MRPL10Q7Z7H8 261 aaKnown RBP16.45■□□□□ 0.22
PHRF1-201ENST00000264555 SRFBP1Q8NEF9 429 aaKnown RBP16.45■□□□□ 0.22
PHRF1-201ENST00000264555 ZHX1-C8orf76Q96EF9 292 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 RANBP9Q96S59 729 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 IL12RB2Q99665 862 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 C11orf84Q9BUA3 381 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-201ENST00000264555 EPB41L1Q9H4G0 881 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 CLDN7O95471 211 aa16.45■□□□□ 0.22
PHRF1-201ENST00000264555 LUZP2Q86TE4 346 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms