RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 GPR39O43194 453 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 OPA1O60313 960 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 NOBOXO60393 691 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 HAUS5O94927 633 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CPNE6O95741 557 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 RPLP0P05388 317 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CELA2BP08218 269 aaPredicted RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 MTHFD1P11586 935 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 HSD17B2P37059 387 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 SLC1A2P43004 574 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 ACADVLP49748 655 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 IL2P60568 153 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 RPE65Q16518 533 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 AMZ1Q400G9 498 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 KHDC1Q4VXA5 237 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 TEDDM1Q5T9Z0 273 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 UNC5DQ6UXZ4 953 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 TMEM26Q6ZUK4 368 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CCDC91Q7Z6B0 441 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 OOSP2Q86WS3 158 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 RELL1Q8IUW5 271 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CNTN4Q8IWV2 1026 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 LSMEM2Q8N112 164 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CACTIN-AS1Q8N1I8 211 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 MYO1HQ8N1T3 1032 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 NKAPQ8N5F7 415 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 ACVR1CQ8NER5 493 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 CFAP61Q8NHU2 1237 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 SLC37A2Q8TED4 501 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 LCN9Q8WX39 176 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 NCSTNQ92542 709 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 LPGAT1Q92604 370 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 RAD51AP1Q96B01 352 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 ELMO2Q96JJ3 720 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 C9orf72Q96LT7 481 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 SRMSQ9H3Y6 488 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 UTP6Q9NYH9 597 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 MARCH4Q9P2E8 410 aaPredicted RBP12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 NFU1Q9UMS0 254 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 RNF215Q9Y6U7 377 aa12.28□□□□□ -0.44
CLNS1A-201ENST00000263309 MAP1BP46821 2468 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 ERLIN1O75477 346 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 KRT38O76015 456 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 UBXN7O94888 489 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 MT-CO3P00414 261 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 INHBAP08476 426 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 PRSS56P0CW18 603 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 CYP2A7P20853 494 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 SAT1P21673 171 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 CNTFP26441 200 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 AOAHP28039 575 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 ATP5DP30049 168 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 SSTR1P30872 391 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 GP5P40197 560 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 MSH2P43246 934 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 PMS2P54278 862 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 B4GALNT1Q00973 533 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 FOXC1Q12948 553 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 ABRQ12979 859 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 EIF3IQ13347 325 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 UAP1Q16222 522 aaPredicted RBP12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 KYNUQ16719 465 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 TMEM164Q5U3C3 297 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 GUSBP11Q6P575 273 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 NEK10Q6ZWH5 1172 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 RAPH1Q70E73 1250 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 C11orf96Q7Z7L8 435 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 PDZD3Q86UT5 571 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 DENND6AQ8IWF6 608 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 PPM1NQ8N819 430 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 MCOLN3Q8TDD5 553 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 PWWP2AQ96N64 755 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 CMKLR1Q99788 373 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 PPCSQ9HAB8 311 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 SLC40A1Q9NP59 571 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 MOCS1Q9NZB8 636 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 TLK1Q9UKI8 766 aa12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 PNMA8BQ9ULN7 279 aaPredicted RBP12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 TDRKHQ9Y2W6 561 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-201ENST00000263309 CFAP47Q6ZTR5 3102 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 TCRBV9S1A1TA0A576 114 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 FAM221BA6H8Z2 402 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 LILRA5A6NI73 299 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 BANF1O75531 89 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 AHSGP02765 367 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 PROS1P07225 676 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 GIMD1P0DJR0 217 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 STMN1P16949 149 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 CD9P21926 228 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 CCR7P32248 378 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 CSTF2P33240 577 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 SHMT2P34897 504 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 SERPINB9P50453 376 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 MAZP56270 477 aaKnown RBP12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 POU4F1Q01851 419 aa12.26□□□□□ -0.45
CLNS1A-201ENST00000263309 TRA2AQ13595 282 aaKnown RBP eCLIP12.26□□□□□ -0.454e-8■□□□□ 9.8
CLNS1A-201ENST00000263309 SEMA3AQ14563 771 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms