RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 LIN7AO14910 233 aaPredicted RBP22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 MATN4O95460 622 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 GPR89BP0CG08 455 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 MYCLP1P12525 358 aaPredicted RBP22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 PCBP2Q15366 365 aaKnown RBP eCLIP22.42■■□□□ 1.181e-6■■■■■ 28.5
SMARCB1-201ENST00000263121 FBXO48Q5FWF7 155 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 TMEM31Q5JXX7 168 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 CDKL4Q5MAI5 379 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 DOK6Q6PKX4 331 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 UBE2R2Q712K3 238 aaPredicted RBP22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 CUZD1Q86UP6 607 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 AGR3Q8TD06 166 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 CCT6BQ92526 530 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 FOXJ1Q92949 421 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 NSUN5Q96P11 429 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 WWP1Q9H0M0 922 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 THEGQ9P2T0 379 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 PCTPQ9UKL6 214 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 PDE10AQ9Y233 779 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 SLC31A1O15431 190 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 POP7O75817 140 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 DCTN3O75935 186 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 PREPP48147 710 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 CDH13P55290 713 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 CDKL1Q00532 357 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 CRTC3Q6UUV7 619 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 PGBD3Q8N328 593 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 DENND6BQ8NEG7 585 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 OR2L2Q8NH16 312 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 SKA2Q8WVK7 121 aaPredicted RBP22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 EBF4Q9BQW3 602 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 PARVBQ9HBI1 364 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 TNFRSF12AQ9NP84 129 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 FZD3Q9NPG1 666 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 ASB1Q9Y576 335 aa22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 TNPO3Q9Y5L0 923 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-201ENST00000263121 ATXN2Q99700 1313 aaKnown RBP22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 SLCO1B7G3V0H7 640 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 TAPBPO15533 448 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 GRID2O43424 1007 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 GUCA1CO95843 209 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 TSPAN8P19075 237 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 CLCQ05315 142 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 SH2D4BQ5SQS7 431 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 SULT1C3Q6IMI6 304 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 ANO7Q6IWH7 933 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 UBALD2Q8IYN6 164 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 FITM2Q8N6M3 262 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 HM13Q8TCT9 377 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 UBTD2Q8WUN7 234 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 RHBDF1Q96CC6 855 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 VTI1BQ9UEU0 232 aa22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 EIF2B4Q9UI10 523 aaKnown RBP22.41■■□□□ 1.18
SMARCB1-201ENST00000263121 MGAT4DA6NG13 374 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 E2F3O00716 465 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 HDAC3O15379 428 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 PSIP1O75475 530 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 RPIAP49247 311 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 IDH3AP50213 366 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 ARHGAP8P85298 464 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 LCP2Q13094 533 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 EPGNQ6UW88 154 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 YTHDF3Q7Z739 585 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 LRRTM4Q86VH4 590 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 CFAP206Q8IYR0 622 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 KIRREL3Q8IZU9 778 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 OXR1Q8N573 874 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 TSTD1Q8NFU3 115 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 ESAMQ96AP7 390 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 SKA1Q96BD8 255 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 EGFL8Q99944 293 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 APOOQ9BUR5 198 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 ZBTB26Q9HCK0 441 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 HEY2Q9UBP5 337 aa22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 DNMT3AQ9Y6K1 912 aaPredicted RBP22.4■■□□□ 1.18
SMARCB1-201ENST00000263121 TMEM233B4DJY2 109 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 LATO43561 262 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 SEMA4FO95754 770 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 PDHA2P29803 388 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 MAPK9P45984 424 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 HNRNPH2P55795 449 aaKnown RBP22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 PLOD1Q02809 727 aaPredicted RBP22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 TUBB3Q13509 450 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 C18orf21Q32NC0 220 aaPredicted RBP22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 MAPK15Q8TD08 544 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 TRPC4APQ8TEL6 797 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 LRRC37BQ96QE4 947 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 HHIPQ96QV1 700 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 TMEM79Q9BSE2 394 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 PRKAB1Q9Y478 270 aa22.39■■□□□ 1.18
SMARCB1-201ENST00000263121 PPP6CO00743 305 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 HOXC4P09017 264 aaPredicted RBP22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 CYP2A7P20853 494 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 SERPINB3P29508 390 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 SH3BP2P78314 561 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 PLA2G4EQ3MJ16 856 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 VWA5B1Q5TIE3 1220 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 STON2Q8WXE9 905 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 FAR2Q96K12 515 aa22.39■■□□□ 1.17
SMARCB1-201ENST00000263121 TRIM54Q9BYV2 358 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms