RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CBX2Q14781 532 aaPredicted RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 SF1Q15637 639 aaKnown RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 FBXO42Q6P3S6 717 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 TNFAIP8L2Q6P589 184 aaPredicted RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 LCLAT1Q6UWP7 414 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 OR2L5Q8NG80 312 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 OR9I1Q8NGQ6 314 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 OR5AK3PQ8NH89 298 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 RAB2BQ8WUD1 216 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 AP2M1Q96CW1 435 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 MTERF1Q99551 399 aaKnown RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 TMEM109Q9BVC6 243 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 PHF24Q9UPV7 400 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 ZFP37Q9Y6Q3 630 aaPredicted RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 MAGEB17A8MXT2 336 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 PRKD3O94806 890 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 GADD45GO95257 159 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 STATHP02808 62 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 RPS3AP61247 264 aaKnown RBP11.9□□□□□ -0.5
SMG6-201ENST00000263073 LYPLAL1Q5VWZ2 237 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 PSMG2Q969U7 264 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 MOCOSQ96EN8 888 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 NSMCE3Q96MG7 304 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 GIMAP2Q9UG22 337 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 ADGRB1O14514 1584 aa11.9□□□□□ -0.5
SMG6-201ENST00000263073 GABBR2O75899 941 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 DGKQP52824 942 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 ARFIP1P53367 373 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 ARPC4P59998 168 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 ZNF697Q5TEC3 545 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 ARMC10Q8N2F6 343 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 SPERTQ8NA61 448 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 PPP1R16AQ96I34 528 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 NEK6Q9HC98 313 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 MTRRQ9UBK8 725 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.51
SMG6-201ENST00000263073 NCKAP1Q9Y2A7 1128 aa11.9□□□□□ -0.51
SMG6-201ENST00000263073 PRMT5O14744 637 aaPredicted RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 GCATO75600 419 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 IFNGP01579 166 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 RPL3P39023 403 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 CHIT1Q13231 466 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 COL9A2Q14055 689 aaPredicted RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 STRADAQ7RTN6 431 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 KCT2Q8NC54 265 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 SOX17Q9H6I2 414 aaPredicted RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 C1RP00736 705 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 PCCBP05166 539 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 CLUP10909 449 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 IL1R2P27930 398 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 HMGCS1Q01581 520 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 MEP1AQ16819 746 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 MSS51Q4VC12 460 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 TNFAIP8L3Q5GJ75 292 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 PIM3Q86V86 326 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 ERI1Q8IV48 349 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 CFAP206Q8IYR0 622 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 DTX3Q8N9I9 347 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 TMBIM1Q969X1 311 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 TMEM74Q96NL1 305 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 INTS10Q9NVR2 710 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 SPIN1Q9Y657 262 aaPredicted RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 C5orf60A6NFR6 353 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 H3BM21 787 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 ARPC2O15144 300 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 PRKCHP24723 683 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 GRM5P41594 1212 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 MYBPC3Q14896 1274 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 SLC2A7Q6PXP3 512 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 ARRDC4Q8NCT1 418 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 C17orf50Q8WW18 174 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 SMG7Q92540 1137 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 PMEPA1Q969W9 287 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 TMED9Q9BVK6 235 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 POLR2J2Q9GZM3 115 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 CHST10O43529 356 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 TFPIP10646 304 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 NT5EP21589 574 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 CLCNKBP51801 687 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 WSCD2Q2TBF2 565 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 CAPN13Q6MZZ7 669 aaPredicted RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 CHSY3Q70JA7 882 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 TDRPQ86YL5 185 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 PYCR2Q96C36 320 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 C12orf43Q96C57 262 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 NUP50Q9UKX7 468 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 ARHGEF28Q8N1W1 1705 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 LOC100509620A0A075B734 347 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 DCLK1O15075 740 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 CORO1AP31146 461 aaKnown RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 AKT2P31751 481 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 GNALP38405 381 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 RGS8P57771 180 aaPredicted RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 CREB5Q02930 508 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 METTL21CQ5VZV1 264 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
SMG6-201ENST00000263073 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
SMG6-201ENST00000263073 IQCHQ86VS3 1027 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms