RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TCTN3Q6NUS6 607 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 KIAA1328Q86T90 577 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 SYVN1Q86TM6 617 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 TMEM135Q86UB9 458 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 NAT14Q8WUY8 206 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 KRT35Q92764 455 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 FAM118BQ9BPY3 351 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 SLC25A23Q9BV35 468 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 OSBPL8Q9BZF1 889 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 KIR3DX1Q9H7L2 352 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 SLC24A2Q9UI40 661 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 SERTAD3Q9UJW9 196 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 PCDHGA6Q9Y5G7 932 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 MYO18BQ8IUG5 2567 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 DDX3YO15523 660 aaKnown RBP11.93□□□□□ -0.5
TRAF4-202ENST00000262396 RECKO95980 971 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 ATP1B2P14415 290 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-202ENST00000262396 MC4RP32245 332 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 LMAN1P49257 510 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 RPS18P62269 152 aaKnown RBP11.93□□□□□ -0.5
TRAF4-202ENST00000262396 BCL7AQ4VC05 210 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 SYTL3Q4VX76 610 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 FBXO38Q6PIJ6 1188 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 CERS6Q6ZMG9 384 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 SNX20Q7Z614 316 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 CARFQ8N187 725 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 TXLNBQ8N3L3 684 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 UBL4BQ8N7F7 174 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 ACVR1CQ8NER5 493 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-202ENST00000262396 OR13C4Q8NGS5 318 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 CCDC110Q8TBZ0 833 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.93□□□□□ -0.58e-6■■■□□ 18.3
TRAF4-202ENST00000262396 SPATA13Q96N96 652 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 TLR10Q9BXR5 811 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 FEZ2Q9UHY8 353 aaPredicted RBP11.93□□□□□ -0.5
TRAF4-202ENST00000262396 TFR2Q9UP52 801 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 PLAAQ9Y263 795 aa11.93□□□□□ -0.5
TRAF4-202ENST00000262396 GOLGA6L3A6NEY3 463 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 SLC9B1P1A6NJY1 282 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 TMEM150CB9EJG8 249 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 C9J4A7 227 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 F8W8V4 182 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 PJA2O43164 708 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 KDM1AO60341 852 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 FURINP09958 794 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 AGXTP21549 392 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 CTNNA1P35221 906 aaKnown RBP11.92□□□□□ -0.5
TRAF4-202ENST00000262396 KPNA2P52292 529 aaKnown RBP11.92□□□□□ -0.5
TRAF4-202ENST00000262396 MLLT10P55197 1068 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 CHAF1BQ13112 559 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 SPARCL1Q14515 664 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 UGT8Q16880 541 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 GPR33Q49SQ1 333 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 SARM1Q6SZW1 724 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 GPR135Q8IZ08 494 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 NXPE1Q8N323 547 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 RMDN2Q96LZ7 410 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 TTC1Q99614 292 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 ACTR5Q9H9F9 607 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-202ENST00000262396 SYTL2Q9HCH5 934 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 C1GALT1Q9NS00 363 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 ZDHHC3Q9NYG2 299 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 SMARCAL1Q9NZC9 954 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 ANKMY1Q9P2S6 941 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 GPN3Q9UHW5 284 aaPredicted RBP11.92□□□□□ -0.5
TRAF4-202ENST00000262396 AMFRQ9UKV5 643 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 EFR3BQ9Y2G0 817 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 PCDHA3Q9Y5H8 950 aa11.92□□□□□ -0.5
TRAF4-202ENST00000262396 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
TRAF4-202ENST00000262396 C2orf74A8MZ97 194 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 E7EQ34 232 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 MEN1O00255 615 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 GAPDHSO14556 408 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-202ENST00000262396 PSMD3O43242 534 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 DNAJB5O75953 348 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 HBQ1P09105 142 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 CA5AP35218 305 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 PRLHRP49683 370 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 TBX2Q13207 712 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-202ENST00000262396 PRKG2Q13237 762 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 OLIG2Q13516 323 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 SEMA5AQ13591 1074 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 KYNUQ16719 465 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 RANBP10Q6VN20 620 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 PEX26Q7Z412 305 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 AMIGO1Q86WK6 493 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 TMTC1Q8IUR5 882 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 FAM26EQ8N5C1 309 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 TAB3Q8N5C8 712 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-202ENST00000262396 TC2NQ8N9U0 490 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 DNAAF3Q8N9W5 541 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 PHC3Q8NDX5 983 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 LINC00615Q96LM1 132 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-202ENST00000262396 HGH1Q9BTY7 390 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 ING2Q9H160 280 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 CHST8Q9H2A9 424 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 MVB12BQ9H7P6 319 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms