RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CYP20A1Q6UW02 462 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 AHSA2Q719I0 299 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 VTCN1Q7Z7D3 282 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 SPATA2LQ8IUW3 424 aaPredicted RBP12.79□□□□□ -0.36
SNX1-201ENST00000261889 SYTL1Q8IYJ3 562 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 FAM83FQ8NEG4 500 aaPredicted RBP12.79□□□□□ -0.36
SNX1-201ENST00000261889 ARRDC2Q8TBH0 407 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 CHPT1Q8WUD6 406 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 NODALQ96S42 347 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 CGREF1Q99674 301 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 BBS2Q9BXC9 721 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 ZBTB20Q9HC78 741 aaPredicted RBP12.79□□□□□ -0.36
SNX1-201ENST00000261889 SAGE1Q9NXZ1 904 aa12.79□□□□□ -0.36
SNX1-201ENST00000261889 ABT1Q9ULW3 272 aaKnown RBP12.79□□□□□ -0.36
SNX1-201ENST00000261889 NDUFB5O43674 189 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 ABCB7O75027 752 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 AOC2O75106 756 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 JRKO75564 520 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 CYP7B1O75881 506 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SERPINA1P01009 418 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 GPIP06744 558 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 CHRM5P08912 532 aaPredicted RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 TNFRSF1BP20333 461 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 VEGFBP49765 207 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 ALDH3A2P51648 485 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 MS4A13Q5J8X5 152 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 C10orf120Q5SQS8 335 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 GPRIN3Q6ZVF9 776 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 CEP68Q76N32 757 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SKA2Q8WVK7 121 aaPredicted RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 L3HYPDHQ96EM0 354 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 CDKN2AIPNLQ96HQ2 116 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 EGFL8Q99944 293 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SMPD4Q9NXE4 827 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 TAS2R16Q9NYV7 291 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 LEF1Q9UJU2 399 aaPredicted RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 DERAQ9Y315 318 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 CLDN25C9JDP6 229 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SLC1A7O00341 560 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 MGEA5O60502 916 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 DEAF1O75398 565 aaPredicted RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 IRF1P10914 325 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 KCNE1P15382 129 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 HCAR3P49019 387 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SLC14A1Q13336 389 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 CPSF6Q16630 551 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNX1-201ENST00000261889 ZNF648Q5T619 568 aaPredicted RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 GTF2IRD2BQ6EKJ0 949 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 DLEU7Q6UYE1 221 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 GLT6D1Q7Z4J2 308 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 GTF2IRD2Q86UP8 949 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 OR4F6Q8NGB9 312 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 NETO1Q8TDF5 533 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 EGLN2Q96KS0 407 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 TINF2Q9BSI4 451 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 INPP5KQ9BT40 448 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 BOCQ9BWV1 1114 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SCHIP1Q9P0W5 487 aaPredicted RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 SLC12A8A0AV02 714 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 H0Y626 953 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 H0YJX3 145 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 CBX4O00257 560 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 RFXAPO00287 272 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 NDUFS2O75306 463 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 SEC14L2O76054 403 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 TRIM16O95361 564 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 ALDH1A1P00352 501 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 HSMCR30P0CW71 290 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 RENBPP51606 427 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 PRKG2Q13237 762 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 FAM98BQ52LJ0 330 aaKnown RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 LRRC73Q5JTD7 316 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 TAF2Q6P1X5 1199 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 MDGA1Q8NFP4 955 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 OSCP1Q8WVF1 389 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 ZNF583Q96ND8 569 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 LRRC3Q9BY71 257 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNX1-201ENST00000261889 PCTPQ9UKL6 214 aa12.78□□□□□ -0.36
SNX1-201ENST00000261889 DNMT3AQ9Y6K1 912 aaPredicted RBP12.78□□□□□ -0.36
SNX1-201ENST00000261889 RBM47A0AV96 593 aaKnown RBP12.77□□□□□ -0.36
SNX1-201ENST00000261889 SMIM30A4D0T7 59 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 ANXA6P08133 673 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 CTF1Q16619 201 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 MRNIPQ6NTE8 343 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 USP51Q70EK9 711 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 FRA10AC1Q70Z53 315 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 UBE2J2Q8N2K1 259 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 DNAJC5GQ8N7S2 189 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 STAG3L4Q8TBR4 150 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 FKBP10Q96AY3 582 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 MFSD1Q9H3U5 465 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 CCSER2Q9H7U1 834 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms