RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SLC13A3Q8WWT9 602 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 C16orf70Q9BSU1 422 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 LRRC3Q9BY71 257 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 EHD1Q9H4M9 534 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 SIAEQ9HAT2 523 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 ANKRD36CQ5JPF3 1778 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 SCN7AQ01118 1682 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 IGKV6D-21A0A0A0MT36 114 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 LOC100130705A0A1B0GUX0 176 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 EFCAB9A8MZ26 197 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 PER2O15055 1255 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 SCAMP1O15126 338 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 MED26O95402 600 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 IL1BP01584 269 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 UGT2B4P06133 528 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 CKMP06732 381 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 ZNF772Q68DY9 489 aaPredicted RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 PAQR9Q6ZVX9 377 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 RTL3Q8N8U3 475 aaKnown RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 TTC29Q8NA56 475 aaPredicted RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 OR5AK3PQ8NH89 298 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 IGSF8Q969P0 613 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 SH3KBP1Q96B97 665 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 ROPN1LQ96C74 230 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 IL12RB2Q99665 862 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 APOL4Q9BPW4 351 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 POLR3BQ9NW08 1133 aaPredicted RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 AGO1Q9UL18 857 aaKnown RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 RAI2Q9Y5P3 530 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 CDK5RAP2Q96SN8 1893 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 AQP12BA6NM10 295 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 ZNF99A8MXY4 864 aaPredicted RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 PRRG1O14668 218 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 RGS14O43566 566 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 S1PR4O95977 384 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 CHI3L1P36222 383 aaPredicted RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 PFKPQ01813 784 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 TRAP1Q12931 704 aaKnown RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 HERC3Q15034 1050 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 ZC3H12BQ5HYM0 836 aaKnown RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 PSAPL1Q6NUJ1 521 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 TMEM207Q6UWW9 146 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 CARM1Q86X55 608 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 EPHX4Q8IUS5 362 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 AQP12AQ8IXF9 295 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 TOP6BLQ8N6T0 577 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 VANGL1Q8TAA9 524 aaPredicted RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 ADGRE3Q9BY15 652 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 ANKRD60Q9BZ19 345 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 RAB23Q9ULC3 237 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 KLHL20Q9Y2M5 609 aa9.95□□□□□ -0.82
PALB2-201ENST00000261584 MRPS7Q9Y2R9 242 aaKnown RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 ARIH1Q9Y4X5 557 aaPredicted RBP9.95□□□□□ -0.82
PALB2-201ENST00000261584 EFCAB10A6NFE3 127 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 RGS10O43665 173 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 STATHP02808 62 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 MBL2P11226 248 aaPredicted RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 EPB42P16452 691 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 GJA8P48165 433 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 MOGQ16653 247 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ZNF549Q6P9A3 640 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ZNF605Q86T29 641 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 STK40Q8N2I9 435 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 OR10T2Q8NGX3 314 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 TBC1D15Q8TC07 691 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 OMA1Q96E52 524 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 OTUB1Q96FW1 271 aaPredicted RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 COQ7Q99807 217 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 TRMOQ9BU70 441 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 SEZ6LQ9BYH1 1024 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 DCSTAMPQ9H295 470 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ERVK13-1Q9NX77 482 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 MAGEL2Q9UJ55 1249 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 OR2AG2A6NM03 316 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 C5orf58C9J3I9 102 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 MT-ND2P03891 347 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ZNF12P17014 697 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 HPCAL1P37235 193 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 SPIBQ01892 262 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 IRF8Q02556 426 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 PLD1Q13393 1074 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 RAPSNQ13702 412 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 GTF2H2Q13888 395 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ABRAXAS2Q15018 415 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 SYTL3Q4VX76 610 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 C6orf141Q5SZD1 244 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 GTF2H2CQ6P1K8 395 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 HID1Q8IV36 788 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 TMEM132CQ8N3T6 1108 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ACDQ96AP0 544 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 NECTIN4Q96NY8 510 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 VPS35Q96QK1 796 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 CNPPD1Q9BV87 410 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 LRTM1Q9HBL6 345 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 VAPAQ9P0L0 249 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 PADI3Q9ULW8 664 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 IGKV6-21A0A0C4DH24 114 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 CCRL2O00421 344 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 PIRO00625 290 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 PTGESO14684 152 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms