RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 DNASE2BQ8WZ79 361 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 NUS1Q96E22 293 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 PHF21BQ96EK2 531 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 L3HYPDHQ96EM0 354 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 NUSAP1Q9BXS6 441 aaKnown RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 KCNK4Q9NYG8 393 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 EIF2B4Q9UI10 523 aaKnown RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 HAO1Q9UJM8 370 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 RNF112Q9ULX5 631 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 CEP192Q8TEP8 1941 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ZNF195O14628 629 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 HGSO14964 777 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-201ENST00000258962 SMIM24O75264 130 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 DCTN3O75935 186 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 TPBGLP0DKB5 382 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 ATP1B2P14415 290 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-201ENST00000258962 ALOX15P16050 662 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-201ENST00000258962 AKT1P31749 480 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 ADPRHP54922 357 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 AQP5P55064 265 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 SETDB1Q15047 1291 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 ACSBG2Q5FVE4 666 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 ZNF648Q5T619 568 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-201ENST00000258962 DET1Q7L5Y6 550 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 PTGR2Q8N8N7 351 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-201ENST00000258962 GLYATL1Q969I3 302 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 BIRC7Q96CA5 298 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 SPATS2LQ9NUQ6 558 aaKnown RBP17.15■□□□□ 0.34
SRSF1-201ENST00000258962 TSR3Q9UJK0 312 aaKnown RBP17.15■□□□□ 0.34
SRSF1-201ENST00000258962 RAP2CQ9Y3L5 183 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 USP34Q70CQ2 3546 aa17.15■□□□□ 0.34
SRSF1-201ENST00000258962 CCDC189A1A4V9 331 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 PATE3B3GLJ2 98 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 SUPT3HB4E1H0 165 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 K7ESM1 405 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 NEMP1O14524 444 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 SUPT3HO75486 399 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 OR56A5P0C7T3 313 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 IMPDH1P20839 514 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 SERPINB5P36952 375 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 HK3P52790 923 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 CORO7P57737 925 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 LACTB2Q53H82 288 aaPredicted RBP17.14■□□□□ 0.33
SRSF1-201ENST00000258962 ZNF678Q5SXM1 525 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 PEAR1Q5VY43 1037 aaPredicted RBP17.14■□□□□ 0.33
SRSF1-201ENST00000258962 TCEAL6Q6IPX3 200 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 FRMD7Q6ZUT3 714 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 RPS27LQ71UM5 84 aaKnown RBP17.14■□□□□ 0.33
SRSF1-201ENST00000258962 WDR75Q8IWA0 830 aaKnown RBP17.14■□□□□ 0.33
SRSF1-201ENST00000258962 CXorf40AQ8TE69 158 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 TCEAL3Q969E4 200 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 DCUN1D1Q96GG9 259 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 CNDP1Q96KN2 507 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 PANX3Q96QZ0 392 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 GSTO2Q9H4Y5 243 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 CNOT6Q9ULM6 557 aaKnown RBP17.14■□□□□ 0.33
SRSF1-201ENST00000258962 SLC6A14Q9UN76 642 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 ZNF292O60281 2723 aa17.14■□□□□ 0.33
SRSF1-201ENST00000258962 DOCK9Q9BZ29 2069 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 A0A1B0GTW7 788 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 PLRG1O43660 514 aaKnown RBP17.13■□□□□ 0.33
SRSF1-201ENST00000258962 AP1G1O43747 822 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 KLK8O60259 260 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 UBOX5O94941 541 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 DGKAP23743 735 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 CD27P26842 260 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 CCR7P32248 378 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 CCR5P51681 352 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 HERVK_113P63132 956 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 GBX1Q14549 363 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 UNC50Q53HI1 259 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 LDLRAP1Q5SW96 308 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 SLC23A3Q6PIS1 610 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 FAM131CQ96AQ9 280 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 SKA1Q96BD8 255 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 EBF4Q9BQW3 602 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 SIKE1Q9BRV8 207 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 ERVK-6Q9BXR3 956 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 SHCBP1LQ9BZQ2 653 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 ILKAPQ9H0C8 392 aaPredicted RBP17.13■□□□□ 0.33
SRSF1-201ENST00000258962 MYLK2Q9H1R3 596 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 KCTD5Q9NXV2 234 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 KLHL42Q9P2K6 505 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 HEY2Q9UBP5 337 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 TRPM6Q9BX84 2022 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 PI4KAP42356 2102 aa17.13■□□□□ 0.33
SRSF1-201ENST00000258962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.12■□□□□ 0.33
SRSF1-201ENST00000258962 LRRC14BA6NHZ5 514 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 SYCE1LA8MT33 242 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 CFAP99D6REC4 459 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 ANKRD65E5RJM6 399 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 INPP4BO15327 924 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 BCAT2O15382 392 aaPredicted RBP17.12■□□□□ 0.33
SRSF1-201ENST00000258962 LZTS3O60299 673 aaPredicted RBP17.12■□□□□ 0.33
SRSF1-201ENST00000258962 MAGEC1O60732 1142 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 AP2A2O94973 939 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 SIX3O95343 332 aaPredicted RBP17.12■□□□□ 0.33
SRSF1-201ENST00000258962 MSH3P20585 1137 aa17.12■□□□□ 0.33
SRSF1-201ENST00000258962 SDHBP21912 280 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms