RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 FBXO22Q8NEZ5 403 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 OR2T12Q8NG77 320 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 FIG4Q92562 907 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 GTF2H4Q92759 462 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 WBP2Q969T9 261 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 CCDC115Q96NT0 180 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 CARS2Q9HA77 564 aaKnown RBP14.98□□□□□ -0.01
DDX56-201ENST00000258772 RHBDL2Q9NX52 303 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 GLUD1P00367 558 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 ZNF7P17097 686 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 CTPS1P17812 591 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 EEF1B2P24534 225 aaKnown RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 ELAVL2Q12926 359 aaKnown RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 SULT1C3Q6IMI6 304 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 SAPCD2Q86UD0 394 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 ZDHHC13Q8IUH4 622 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 FAM86B1Q8N7N1 296 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 OR13F1Q8NGS4 319 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 OR10A6Q8NH74 314 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 SLC13A3Q8WWT9 602 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 ABTB1Q969K4 478 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 ZBTB18Q99592 522 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 THUMPD3Q9BV44 507 aaKnown RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 CLPBQ9H078 707 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 ING2Q9H160 280 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 ELAC1Q9H777 363 aaKnown RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 MAGEE1Q9HCI5 957 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 EIF3LQ9Y262 564 aaKnown RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 TMEM88BA6NKF7 163 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 MAGEB3O15480 346 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 CA12O43570 354 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 SLC10A3P09131 477 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 ALPIP09923 528 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 IRF1P10914 325 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 MBL2P11226 248 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 JUNBP17275 347 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 ITGB6P18564 788 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 MZF1P28698 734 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 CA5AP35218 305 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 INO80DQ53TQ3 878 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 ENPP6Q6UWR7 440 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 THAP5Q7Z6K1 395 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 SERPINA9Q86WD7 417 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 CARNMT1Q8N4J0 409 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 OVCA2Q8WZ82 227 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 AURKBQ96GD4 344 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 GLT1D1Q96MS3 346 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 BOCQ9BWV1 1114 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 FAM126AQ9BYI3 521 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 TMEM9Q9P0T7 183 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 ADGRE2Q9UHX3 823 aa14.97□□□□□ -0.01
DDX56-201ENST00000258772 EVLQ9UI08 416 aaPredicted RBP14.97□□□□□ -0.01
DDX56-201ENST00000258772 G3V2T6 193 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 FFAR3O14843 346 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 GSTA4O15217 222 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 GPR42O15529 346 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 RGS14O43566 566 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 HPRP00739 348 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 GALTP07902 379 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 MATN1P21941 496 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 RPS3P23396 243 aaKnown RBP eCLIP14.96□□□□□ -0.012e-6■■■■■ 30.9
DDX56-201ENST00000258772 AKT1P31749 480 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 GDF5P43026 501 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 PIK3CGP48736 1102 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 RGS4P49798 205 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 RHOAP61586 193 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 CYP4F3Q08477 520 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 NKG7Q16617 165 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 MAPKAPK3Q16644 382 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 FAM174BQ3ZCQ3 159 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 FAM151BQ6UXP7 276 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 NECAB2Q7Z6G3 386 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 TTC16Q8NEE8 873 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 ZNF548Q8NEK5 533 aaPredicted RBP14.96□□□□□ -0.01
DDX56-201ENST00000258772 FBXO30Q8TB52 745 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 MIPOL1Q8TD10 442 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 TOR3AQ9H497 397 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 IKZF5Q9H5V7 419 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 OARD1Q9Y530 152 aa14.96□□□□□ -0.01
DDX56-201ENST00000258772 SLC25A14O95258 325 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 PRAMEF1O95521 474 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 RPL17P18621 184 aaKnown RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 CD247P20963 164 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 TUFMP49411 452 aaKnown RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 IST1P53990 364 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 MAD2L1Q13257 205 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 SMU1Q2TAY7 513 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 ATXN7L2Q5T6C5 722 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 BROXQ5VW32 411 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 TBC1D15Q8TC07 691 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 LKAAEAR1Q8TD35 194 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 SLC22A17Q8WUG5 538 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 CEP295NLQ96MC4 621 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 RDH12Q96NR8 316 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 EGFL8Q99944 293 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 DPY30Q9C005 99 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 FANCEQ9HB96 536 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 FARSBQ9NSD9 589 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms