RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ATOH8Q96SQ7 321 aa8.94□□□□□ -0.98
CKAP2-201ENST00000258607 LIN28AQ9H9Z2 209 aaKnown RBP8.94□□□□□ -0.98
CKAP2-201ENST00000258607 PARVBQ9HBI1 364 aa8.94□□□□□ -0.98
CKAP2-201ENST00000258607 OR1A2Q9Y585 309 aa8.94□□□□□ -0.98
CKAP2-201ENST00000258607 ANKRD36A6QL64 1941 aa8.94□□□□□ -0.98
CKAP2-201ENST00000258607 ABCA7Q8IZY2 2146 aa8.94□□□□□ -0.98
CKAP2-201ENST00000258607 ABHD14A-ACY1A0A1B0GW23 586 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TARM1B6A8C7 271 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 E2F6O75461 281 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ZDHHC11BP0C7U3 371 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TACR1P25103 407 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 MAP4P27816 1152 aaKnown RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 CCR7P32248 378 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ZNF135P52742 658 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SELPLGQ14242 412 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ARHGAP15Q53QZ3 475 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ZNF542PQ5EBM4 170 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SPANXN4Q5MJ08 99 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ARTNQ5T4W7 220 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 AFMIDQ63HM1 303 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TMEM220Q6QAJ8 160 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TMPRSS11BQ86T26 416 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SETD3Q86TU7 594 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 FUNDC1Q8IVP5 155 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 LILRA2Q8N149 483 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 OR56A4Q8NGH8 313 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TRIB3Q96RU7 358 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TMEM175Q9BSA9 504 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 HAUS8Q9BT25 410 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 FAM126AQ9BYI3 521 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ELOVL2Q9NXB9 296 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 STX18Q9P2W9 335 aaKnown RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 UTS2RQ9UKP6 389 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 INSL6Q9Y581 213 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 CCDC88CQ9P219 2028 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 PRAMEF33A0A0G2JMD5 474 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 FOXD2O60548 495 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ULK1O75385 1050 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TULP3O75386 442 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 RSL1D1O76021 490 aaKnown RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 VARSP26640 1264 aaKnown RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SPAM1P38567 509 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DGKGP49619 791 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 HK2P52789 917 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 LRRC74AQ0VAA2 488 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 STX5Q13190 355 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 CYHR1Q6ZMK1 362 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ZNF621Q6ZSS3 439 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 KIAA0408Q6ZU52 694 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 LIX1Q8N485 282 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ZBTB2Q8N680 514 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 OR5AK3PQ8NH89 298 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 CHFRQ96EP1 664 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SORBS1Q9BX66 1292 aaKnown RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DYRK4Q9NR20 520 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 STOX2Q9P2F5 926 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 PRRT4C9JH25 899 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 H3BQ06 376 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 RTCAO00442 366 aaKnown RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 RAD51BO15315 384 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 NOBOXO60393 691 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DFNA5O60443 496 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ZBTB11O95625 1053 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ESRRBO95718 433 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 CTSAP10619 480 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 GNAZP19086 355 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 IRF8Q02556 426 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 FOLH1Q04609 750 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 CACNG1Q06432 222 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 RIPK1Q13546 671 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 XKR6Q5GH73 641 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 TPGS2Q68CL5 300 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 NET1Q7Z628 596 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DHFR2Q86XF0 187 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 LRRC49Q8IUZ0 686 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 RBFAQ8N0V3 343 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 ZNF786Q8N393 782 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DCAF4L2Q8NA75 395 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SNX19Q92543 992 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 PHOX2BQ99453 314 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 KCTD14Q9BQ13 255 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DPH2Q9BQC3 489 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-201ENST00000258607 KLHL4Q9C0H6 718 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 CCDC90BQ9GZT6 254 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 FAM83DQ9H4H8 585 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 XKR8Q9H6D3 395 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 COQ10BQ9H8M1 238 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SPHK2Q9NRA0 654 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 SPASTQ9UBP0 616 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 LIMD1Q9UGP4 676 aa8.93□□□□□ -0.98
CKAP2-201ENST00000258607 DOCK4Q8N1I0 1966 aa8.92□□□□□ -0.98
CKAP2-201ENST00000258607 LINC01565O15544 149 aa8.92□□□□□ -0.98
CKAP2-201ENST00000258607 TGFB1P01137 390 aa8.92□□□□□ -0.98
CKAP2-201ENST00000258607 OPN1SWP03999 348 aa8.92□□□□□ -0.98
CKAP2-201ENST00000258607 FAM163BP0C2L3 166 aa8.92□□□□□ -0.98
CKAP2-201ENST00000258607 PTPN2P17706 415 aa8.92□□□□□ -0.98
CKAP2-201ENST00000258607 HMGCLP35914 325 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms