RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 KRTCAP2Q8N6L1 136 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 LEMD2Q8NC56 503 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 KLHDC9Q8NEP7 349 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 MCOLN3Q8TDD5 553 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 HTRA1Q92743 480 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 REXO5Q96IC2 774 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 UROC1Q96N76 676 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ZNF599Q96NL3 588 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ATOH8Q96SQ7 321 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SEZ6LQ9BYH1 1024 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TNKS2Q9H2K2 1166 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 NOL6Q9H6R4 1146 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 CSNK1G1Q9HCP0 422 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 LTB4R2Q9NPC1 389 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 DUS2Q9NX74 493 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 PTBP2Q9UKA9 531 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 PCDHB8Q9UN66 801 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SCML2Q9UQR0 700 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TPRKBQ9Y3C4 175 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ANKRD66B4E2M5 251 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 H0YJX3 145 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 WDR47O94967 919 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ANXA5P08758 320 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ENO2P09104 434 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 FAM163BP0C2L3 166 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 WEE1P30291 646 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 S100A5P33763 92 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SOAT1P35610 550 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ALDH3A2P51648 485 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 BMXP51813 675 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 KPNA1P52294 538 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 GALNT1Q10472 559 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 SELPLGQ14242 412 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ABRAXAS2Q15018 415 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TAF1AQ15573 450 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 ATP6AP1Q15904 470 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SYT16Q17RD7 645 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 AAK1Q2M2I8 961 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ZNF829Q3KNS6 432 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 POM121L1PQ3SYA9 428 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 LDLRAD1Q5T700 205 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 KANK2Q63ZY3 851 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 HACD2Q6Y1H2 254 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 MBOAT1Q6ZNC8 495 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PIWIL3Q7Z3Z3 882 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 GOLGA7Q7Z5G4 137 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ITIH5Q86UX2 942 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 TICAM1Q8IUC6 712 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 SNX29P2Q8IUI4 249 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 CENPSQ8N2Z9 138 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 KLHL23Q8NBE8 558 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 GPR156Q8NFN8 814 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RHEBL1Q8TAI7 183 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 CNIH3Q8TBE1 160 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ARRDC2Q8TBH0 407 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RAB2BQ8WUD1 216 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 HPS1Q92902 700 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 MYOCQ99972 504 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 RBM4BQ9BQ04 359 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 RBM4Q9BWF3 364 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 BBS2Q9BXC9 721 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 NPLQ9BXD5 320 aaPredicted RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 NUSAP1Q9BXS6 441 aaKnown RBP4.67□□□□□ -1.66
USP44-201ENST00000258499 KATNBL1Q9H079 304 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ZNF385DQ9H6B1 395 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 REEP1Q9H902 201 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 ZFYVE1Q9HBF4 777 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PSME2Q9UL46 239 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 PCDHB3Q9Y5E6 796 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 GPR45Q9Y5Y3 372 aa4.67□□□□□ -1.66
USP44-201ENST00000258499 FXYD1O00168 92 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 TULP3O75386 442 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 CLDN11O75508 207 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 STK16O75716 305 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ESR1P03372 595 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PGRP06401 933 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ATXN1LP0C7T5 689 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 MTHFD2P13995 350 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 COX7A2P14406 83 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ALOX12P18054 663 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 TYMPP19971 482 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 AGXTP21549 392 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 MZF1P28698 734 aaPredicted RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 POLR2IP36954 125 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 MAPKAPK2P49137 400 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 PRIM2P49643 509 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 GATMP50440 423 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 CLCN2P51788 898 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 YBX1P67809 324 aaKnown RBP4.66□□□□□ -1.66
USP44-201ENST00000258499 IRF8Q02556 426 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 NFATC3Q12968 1075 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 DNASE1L3Q13609 305 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 RCAN2Q14206 197 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 DGUOKQ16854 277 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SLC36A3Q495N2 470 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 SYTL3Q4VX76 610 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 XKR4Q5GH76 650 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 BORAQ6PGQ7 559 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 ZNF773Q6PK81 442 aa4.66□□□□□ -1.66
USP44-201ENST00000258499 DOK6Q6PKX4 331 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms