RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SDHDO14521 159 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 NPC1O15118 1278 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 TAPBPO15533 448 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 S100BP04271 92 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-201ENST00000254816 CBSLP0DN79 551 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 CBSP35520 551 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 GBX1Q14549 363 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 TMEM198Q66K66 360 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 ZNF776Q68DI1 518 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-201ENST00000254816 SDE2Q6IQ49 451 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 ACAD11Q709F0 780 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 ZNF765Q7L2R6 523 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 RALGPS2Q86X27 583 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-201ENST00000254816 OR2T3Q8NH03 318 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 NAF1Q96HR8 494 aaKnown RBP18.53■□□□□ 0.56
TRIM47-201ENST00000254816 MARK4Q96L34 752 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 LENG8Q96PV6 779 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-201ENST00000254816 GABRG3Q99928 467 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 HGH1Q9BTY7 390 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 C1QTNF3Q9BXJ4 246 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 OR2AG1Q9H205 316 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 CXorf56Q9H5V9 222 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 PRR23AA6NEV1 266 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 DCXO43602 365 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 TM7SF2O76062 418 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 FTH1P02794 183 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 HOXB2P14652 356 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 CPOXP36551 454 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 HSPA7P48741 367 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 DPTQ07507 201 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 LCP2Q13094 533 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 SMAD4Q13485 552 aaKnown RBP18.53■□□□□ 0.56
TRIM47-201ENST00000254816 RBBP7Q16576 425 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 DCBLD1Q8N8Z6 715 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 GANCQ8TET4 914 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 NRG4Q8WWG1 115 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 KLK6Q92876 244 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 MYCBPQ99417 103 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-201ENST00000254816 YY1AP1Q9H869 796 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 KLHL42Q9P2K6 505 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 TMCO1Q9UM00 188 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 PTGDR2Q9Y5Y4 395 aa18.53■□□□□ 0.56
TRIM47-201ENST00000254816 A0A1W2PQF6 199 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 KRT87PA6NCN2 255 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 PCCBP05166 539 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 CD72P21854 359 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 CRY1Q16526 586 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 UGT3A2Q3SY77 523 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 DNAL1Q4LDG9 190 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 PLEKHS1Q5SXH7 462 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 RIPOR1Q6ZS17 1223 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 UBE2R2Q712K3 238 aaPredicted RBP18.52■□□□□ 0.56
TRIM47-201ENST00000254816 AFAP1L2Q8N4X5 818 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 PDPRQ8NCN5 879 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 ASB2Q96Q27 587 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 SLC7A8Q9UHI5 535 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 ZNF225Q9UK10 706 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 LRRC42Q9Y546 428 aa18.52■□□□□ 0.56
TRIM47-201ENST00000254816 TRPC5OSA6NMA1 111 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 ENO3P13929 434 aaPredicted RBP18.52■□□□□ 0.55
TRIM47-201ENST00000254816 VCLP18206 1134 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 GDF5P43026 501 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 STARD3Q14849 445 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 ADGRG6Q86SQ4 1221 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 SYVN1Q86TM6 617 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 CLYBLQ8N0X4 340 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 PLCD3Q8N3E9 789 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 FAR2Q96K12 515 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 CATSPER2Q96P56 530 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 CDK15Q96Q40 435 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 NMRK1Q9NWW6 199 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 FBXL12Q9NXK8 326 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 STOML1Q9UBI4 398 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 PTBP2Q9UKA9 531 aaKnown RBP18.52■□□□□ 0.55
TRIM47-201ENST00000254816 SORCS3Q9UPU3 1222 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 TIMM22Q9Y584 194 aa18.52■□□□□ 0.55
TRIM47-201ENST00000254816 ATP6AP2A0A1C7CYW4 349 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 AZIN1O14977 448 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 NUAK1O60285 661 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 ATG13O75143 517 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 ATP6AP2O75787 350 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 CD1EP15812 388 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 PREPP48147 710 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 PRLHRP49683 370 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 GRSF1Q12849 480 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRIM47-201ENST00000254816 OR52B6Q8NGF0 335 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 MAELQ96JY0 434 aaKnown RBP18.51■□□□□ 0.55
TRIM47-201ENST00000254816 TMEM79Q9BSE2 394 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 MEAF6Q9HAF1 191 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 TRPV5Q9NQA5 729 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 ATXN10Q9UBB4 475 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 PDE10AQ9Y233 779 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 DNAJC15Q9Y5T4 150 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 GPC4O75487 556 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 CIB2O75838 187 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 RPIAP49247 311 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 MUM1Q2TAK8 710 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 ASZ1Q8WWH4 475 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 FOXJ1Q92949 421 aa18.51■□□□□ 0.55
TRIM47-201ENST00000254816 RHBDF1Q96CC6 855 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms