RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ACP5P13686 325 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 NDST2P52849 883 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 ABATP80404 500 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 GANABQ14697 944 aaKnown RBP18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 TXNDC8Q6A555 127 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 TMEM214Q6NUQ4 689 aaKnown RBP18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 PRDM8Q9NQV8 689 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 ERVW-1Q9UQF0 538 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 MAGEB3O15480 346 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 SLC35G6P0C7Q6 338 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 IL1R2P27930 398 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 IL10RBQ08334 325 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 DCST1Q5T197 706 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 MCEMP1Q8IX19 187 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 PLIN3O60664 434 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 TGDSO95455 350 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 UBAP2Q5T6F2 1119 aaKnown RBP18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 HFE2Q6ZVN8 426 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 TRPV3Q8NET8 790 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 ZNF570Q96NI8 536 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 SMG9Q9H0W8 520 aaKnown RBP18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 COL6A2P12110 1019 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 ACLYP53396 1101 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 CBX3Q13185 183 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 NDUFA9Q16795 377 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 NEK5Q6P3R8 708 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 MCFD2Q8NI22 146 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 OR51V1Q9H2C8 321 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 HLA-DQB2P05538 268 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 CCND3P30281 292 aaPredicted RBP18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 BNC1Q01954 994 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 ZNF280BQ86YH2 543 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 BRSK1Q8TDC3 778 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 NKD1Q969G9 470 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 EBF4Q9BQW3 602 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 SIX2Q9NPC8 291 aa18.43■□□□□ 0.54
SMARCC1-201ENST00000254480 BTN3A3O00478 584 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 AZGP1P25311 298 aaKnown RBP18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 HKDC1Q2TB90 917 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 CYP2U1Q7Z449 544 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 ATCAYQ86WG3 371 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 AHI1Q8N157 1196 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 ZNF483Q8TF39 744 aaPredicted RBP18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 MRTO4Q9UKD2 239 aaKnown RBP18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 CD247P20963 164 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 ASMTP46597 345 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 GAD2Q05329 585 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 PGBD2Q6P3X8 592 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 DNAJB7Q7Z6W7 309 aaPredicted RBP18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 PLD4Q96BZ4 506 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 TWNKQ96RR1 684 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 TMEM63AO94886 807 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 SIX3O95343 332 aaPredicted RBP18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 IFNW1P05000 195 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 ENPP7Q6UWV6 458 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 RNF31Q96EP0 1072 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 TBX5Q99593 518 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 J3KR12 359 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 CLDN4O14493 209 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 CAMK1Q14012 370 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 RNF220Q5VTB9 566 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 ARL10Q8N8L6 244 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 SNX33Q8WV41 574 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 FEM1AQ9BSK4 669 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 PHF24Q9UPV7 400 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 WWP2O00308 870 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 TGFB1P01137 390 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 SLC10A7Q0GE19 358 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 TMEM198Q66K66 360 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 SNX20Q7Z614 316 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 BRI3BPQ8WY22 251 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 CHCHD6Q9BRQ6 235 aa18.42■□□□□ 0.54
SMARCC1-201ENST00000254480 UGT2B11O75310 529 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 TTKP33981 857 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 ACVRL1P37023 503 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 KCNQ1P51787 676 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 TLE2Q04725 743 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 SLC9B1Q4ZJI4 515 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 CHST4Q8NCG5 386 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 WDR60Q8WVS4 1066 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 OSBPL2Q9H1P3 480 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 B4DGG1 531 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 TM7SF2O76062 418 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 ENPEPQ07075 957 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 AAGABQ6PD74 315 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 RNF19BQ6ZMZ0 732 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 ZNF384Q8TF68 577 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 CLDND1Q9NY35 253 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 HMGCS1Q01581 520 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 TAF1AQ15573 450 aaPredicted RBP18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 ARMCX6Q7L4S7 300 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 OR5AK3PQ8NH89 298 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 MAGEB17A8MXT2 336 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 AVPR1BP47901 424 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 TRAP1Q12931 704 aaKnown RBP18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 PIGVQ9NUD9 493 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 PCDHGB3Q9Y5G1 929 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 LDB2O43679 373 aa18.41■□□□□ 0.54
SMARCC1-201ENST00000254480 RPL10P27635 214 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms