RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PSMC3IPQ9P2W1 217 aaPredicted RBP13.81□□□□□ -0.2
VPS25-201ENST00000253794 TRMT6Q9UJA5 497 aaKnown RBP13.81□□□□□ -0.2
VPS25-201ENST00000253794 DOLKQ9UPQ8 538 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 NFS1Q9Y697 457 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 IKBKGQ9Y6K9 419 aa13.81□□□□□ -0.2
VPS25-201ENST00000253794 ZFC3H1O60293 1989 aaKnown RBP13.8□□□□□ -0.2
VPS25-201ENST00000253794 LY6G6EA0A0G2JKS1 128 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 POC1B-GALNT4F8VUJ3 575 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 KRT38O76015 456 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 SLC35G4P0C7Q5 338 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 ITGB6P18564 788 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 XRCC1P18887 633 aaPredicted RBP13.8□□□□□ -0.2
VPS25-201ENST00000253794 PDHA2P29803 388 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 FASLGP48023 281 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 PREPP48147 710 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 UBE2IP63279 158 aaKnown RBP13.8□□□□□ -0.2
VPS25-201ENST00000253794 HSPA14Q0VDF9 509 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 SYTL3Q4VX76 610 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 PIM3Q86V86 326 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 NAXDQ8IW45 347 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 IQCKQ8N0W5 287 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 SIDT2Q8NBJ9 832 aaKnown RBP13.8□□□□□ -0.2
VPS25-201ENST00000253794 ATXN7L3BQ96GX2 97 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 RMDN2Q96LZ7 410 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 ROPN1BQ9BZX4 212 aaPredicted RBP13.8□□□□□ -0.2
VPS25-201ENST00000253794 ROPN1Q9HAT0 212 aaPredicted RBP13.8□□□□□ -0.2
VPS25-201ENST00000253794 SCHIP1Q9P0W5 487 aaPredicted RBP13.8□□□□□ -0.2
VPS25-201ENST00000253794 BTBD3Q9Y2F9 522 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 WDR37Q9Y2I8 494 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 U3KQA8 63 aa13.8□□□□□ -0.2
VPS25-201ENST00000253794 PDZK1P1A8MUH7 402 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 TM4SF5O14894 197 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 FFAR2O15552 330 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 SIGLEC6O43699 453 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 CDH16O75309 829 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 KRT37O76014 449 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 MATN4O95460 622 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 TSPAN12O95859 305 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 MPC1LP0DKB6 136 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 STMN1P16949 149 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 ZNF37AP17032 561 aaPredicted RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 RPL10P27635 214 aaKnown RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 CRABP2P29373 138 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 PLA2G5P39877 138 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 SLC26A3P40879 764 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 HALP42357 657 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 MAPK9P45984 424 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 RAB10P61026 200 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 USP10Q14694 798 aaKnown RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 NR1D2Q14995 579 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 CLCA4Q14CN2 919 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 TCEA2Q15560 299 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 RPE65Q16518 533 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 C14orf28Q4W4Y0 310 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 LGSNQ5TDP6 509 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 PAQR3Q6TCH7 311 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 UNC5DQ6UXZ4 953 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 TIFABQ6ZNK6 161 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 ZNF438Q7Z4V0 828 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 VRK3Q8IV63 474 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 CEP97Q8IW35 865 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 RBM12BQ8IXT5 1001 aaKnown RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 SLC35F3Q8IY50 421 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 RIBC1Q8N443 379 aaPredicted RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 EID2Q8N6I1 236 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 KYQ8NBH2 561 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 OR6C4Q8NGE1 309 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 SLC37A2Q8TED4 501 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 MZB1Q8WU39 189 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 ZFPM2Q8WW38 1151 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 ANKRD7Q92527 254 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 MTBPQ96DY7 904 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 APOLD1Q96LR9 279 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 INSM2Q96T92 566 aaPredicted RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 WWP1Q9H0M0 922 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 UCK1Q9HA47 277 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 SARS2Q9NP81 518 aaKnown RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 POT1Q9NUX5 634 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 ARGLU1Q9NWB6 273 aaPredicted RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 ZNF624Q9P2J8 865 aaPredicted RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 SLC39A10Q9ULF5 831 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 HEBP2Q9Y5Z4 205 aa13.79□□□□□ -0.2
VPS25-201ENST00000253794 ASCC3Q8N3C0 2202 aaKnown RBP13.79□□□□□ -0.2
VPS25-201ENST00000253794 DMXL1Q9Y485 3027 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 TDRD6O60522 2096 aaKnown RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 B4DGG1 531 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 IFRD1O00458 451 aaPredicted RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 NUDT21O43809 227 aaKnown RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 SNX2O60749 519 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 ALDOAP04075 364 aaKnown RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 SNRPAP09012 282 aaKnown RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 MTHFD1P11586 935 aaKnown RBP13.78□□□□□ -0.2
VPS25-201ENST00000253794 CKMT1AP12532 417 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 PNLIPP16233 465 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 NDUFS1P28331 727 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 SLC19A1P41440 591 aa13.78□□□□□ -0.2
VPS25-201ENST00000253794 RPIAP49247 311 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms