RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PLIN5Q00G26 463 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 KIAA0040Q15053 153 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 MACC1Q6ZN28 852 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 MBOAT1Q6ZNC8 495 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 ANKRD33Q7Z3H0 272 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 GPR26Q8NDV2 337 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 ADI1Q9BV57 179 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 ATP13A3Q9H7F0 1226 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 TLR9Q9NR96 1032 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 DMTF1Q9Y222 760 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 DYTNA2CJ06 578 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 GRXCR2A6NFK2 248 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 RASAL1O95294 804 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 SLC2A4P14672 509 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 SPAM1P38567 509 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 CTSOP43234 321 aaPredicted RBP19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 RPL38P63173 70 aaKnown RBP19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 PTGR1Q14914 329 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 PLEKHG6Q3KR16 790 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 AASDHQ4L235 1098 aaPredicted RBP19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 PYCR3Q53H96 274 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 HS6ST3Q8IZP7 471 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 NXPE1Q8N323 547 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 SEPHS2Q99611 448 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 C19orf43Q9BQ61 176 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 HTATIP2Q9BUP3 242 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 ABCB8Q9NUT2 735 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 WWOXQ9NZC7 414 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 PTTG2Q9NZH5 202 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 OPTCQ9UBM4 332 aa19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 LSM7Q9UK45 103 aaKnown RBP19.18■□□□□ 0.66
CDC42EP1-201ENST00000249014 H3BSA7 217 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 EI24O14681 340 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 IGSF6O95976 241 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 UMPSP11172 480 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 FCGR1AP12314 374 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 ZNF23P17027 643 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 JAK1P23458 1154 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 VARSP26640 1264 aaKnown RBP19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 STK19P49842 368 aaPredicted RBP19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 MERTKQ12866 999 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 ADRM1Q16186 407 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 HTR3DQ70Z44 454 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 MPP4Q96JB8 637 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 CGREF1Q99674 301 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 ANGPTL3Q9Y5C1 460 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 MYOFQ9NZM1 2061 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 PARNO95453 639 aaKnown RBP19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 CHRM1P11229 460 aaPredicted RBP19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 GJA1P17302 382 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 MAPK8P45983 427 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 CDH15P55291 814 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 HMGCS1Q01581 520 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 TLE2Q04725 743 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 SLC36A3Q495N2 470 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 TMTC4Q5T4D3 741 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 LYPLAL1Q5VWZ2 237 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 GLYATQ6IB77 296 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 SULT1C3Q6IMI6 304 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 CNKSR3Q6P9H4 555 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 BORAQ6PGQ7 559 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 CRTC1Q6UUV9 634 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 DDX53Q86TM3 631 aaKnown RBP19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 ITIH5Q86UX2 942 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 PROSER1Q86XN7 944 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 TBC1D21Q8IYX1 336 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 DTWD1Q8N5C7 304 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 TRIML2Q8N7C3 387 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 OR2AP1Q8NGE2 309 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 TMIGD2Q96BF3 282 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 PPP3R2Q96LZ3 170 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 HAUS8Q9BT25 410 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 ABCG8Q9H221 673 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 PAK6Q9NQU5 681 aaPredicted RBP19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 KIAA1522Q9P206 1035 aaPredicted RBP19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 PCDHB3Q9Y5E6 796 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 CEPT1Q9Y6K0 416 aa19.17■□□□□ 0.66
CDC42EP1-201ENST00000249014 AGAP14A8MT82 685 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 MSH3P20585 1137 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 MYF6P23409 242 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 SERPINA4P29622 427 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 DEFB103AP81534 67 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 TRIM60Q495X7 471 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 GPR33Q49SQ1 333 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 GRAMD4Q6IC98 578 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 B3GNT6Q6ZMB0 384 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 SLC39A5Q6ZMH5 540 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 CBARPQ8N350 705 aaPredicted RBP19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 CPXM2Q8N436 756 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 FIBINQ8TAL6 211 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 CLK4Q9HAZ1 481 aaKnown RBP19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 RC3H2Q9HBD1 1191 aaKnown RBP19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 LATS2Q9NRM7 1088 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 SPG21Q9NZD8 308 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 VAPAQ9P0L0 249 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 KLQ9UEF7 1012 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 SH3BP1Q9Y3L3 701 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 KANSL1LA0AUZ9 987 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 LOC730098B7Z3J9 87 aa19.16■□□□□ 0.66
CDC42EP1-201ENST00000249014 BNIP3LO60238 219 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms