RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MATN4O95460 622 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 SLC2A4P14672 509 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ZNF26P17031 533 aaPredicted RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ZFP36L2P47974 494 aaKnown RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ILF2Q12905 390 aaKnown RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 PTGR1Q14914 329 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 HTR3DQ70Z44 454 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 KIAA2013Q8IYS2 634 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 BEGAINQ9BUH8 593 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 NUSAP1Q9BXS6 441 aaKnown RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 SLC52A3Q9NQ40 469 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 RNF11Q9Y3C5 154 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 VPS4BO75351 444 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 LATS1O95835 1130 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 SLC7A1P30825 629 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 GSK3BP49841 420 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ADARP55265 1226 aaKnown RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 LIPEQ05469 1076 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 TRAP1Q12931 704 aaKnown RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 RCAN2Q14206 197 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 CDKN3Q16667 212 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 HACD2Q6Y1H2 254 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 SPATA19Q7Z5L4 167 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 NXPE1Q8N323 547 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 FIBINQ8TAL6 211 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 HOPXQ9BPY8 73 aaPredicted RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 C1QTNF3Q9BXJ4 246 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 Q9H521 79 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ASAH2Q9NR71 780 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 HCFC2Q9Y5Z7 792 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 PRR35P0CG20 571 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 MTPNP58546 118 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 NTHL1P78549 312 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 BOP1Q14137 746 aaKnown RBP15.48■□□□□ 0.07
LRFN1-201ENST00000248668 OGFOD2Q6N063 350 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 DUS1LQ6P1R4 473 aaKnown RBP15.48■□□□□ 0.07
LRFN1-201ENST00000248668 PYCR2Q96C36 320 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 SEPHS2Q99611 448 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 BBS2Q9BXC9 721 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 LRRC3Q9BY71 257 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 ZBP1Q9H171 429 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 ALG2Q9H553 416 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 PLXNA4Q9HCM2 1894 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 A0A0C4DFX4 3053 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 DHRS12A0PJE2 317 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 ASLP04424 464 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 DGKAP23743 735 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 GALK1P51570 392 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 ERVFC1P60507 584 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 SNRPD1P62314 119 aaKnown RBP15.48■□□□□ 0.07
LRFN1-201ENST00000248668 TRAF3Q13114 568 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 TEAD2Q15562 447 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 CYP51A1Q16850 503 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 MYLK3Q32MK0 819 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 ZNF648Q5T619 568 aaPredicted RBP15.48■□□□□ 0.07
LRFN1-201ENST00000248668 C22orf39Q6P5X5 142 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 CATSPER1Q8NEC5 780 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 CYB5D2Q8WUJ1 264 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 SCAMP4Q969E2 229 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 TMEM125Q96AQ2 219 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 KCTD14Q9BQ13 255 aaPredicted RBP15.48■□□□□ 0.07
LRFN1-201ENST00000248668 TCF25Q9BQ70 676 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 TMEM79Q9BSE2 394 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 OPTCQ9UBM4 332 aa15.48■□□□□ 0.07
LRFN1-201ENST00000248668 RPL10P27635 214 aaKnown RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CBX3Q13185 183 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CBX2Q14781 532 aaPredicted RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CPSF6Q16630 551 aaKnown RBP eCLIP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 ZBTB49Q6ZSB9 765 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 SPRED2Q7Z698 418 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 ELMOD1Q8N336 334 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 MINDY1Q8N5J2 469 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 SUV39H2Q9H5I1 410 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 COMMD3-BMI1R4GMX3 469 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 SOCS2O14508 198 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 LILRB3O75022 631 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 AKT1P31749 480 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 MYBPC1Q00872 1141 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 PTSQ03393 145 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 SELPLGQ14242 412 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CYP20A1Q6UW02 462 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 SERPINA13PQ6UXR4 307 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CMTR2Q8IYT2 770 aaKnown RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 EFHD1Q9BUP0 239 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 ABCD2Q9UBJ2 740 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 TDRKHQ9Y2W6 561 aaKnown RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 NUP214P35658 2090 aaPredicted RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CROCCQ5TZA2 2017 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 ZFC3H1O60293 1989 aaKnown RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 ARHGAP10A1A4S6 786 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CTSAP10619 480 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 SLC7A9P82251 487 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 PLOD1Q02809 727 aaPredicted RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 CRY1Q16526 586 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 NANOGP8Q6NSW7 305 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 FAM217AQ8IXS0 508 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 BEND7Q8N7W2 519 aaPredicted RBP15.47■□□□□ 0.07
LRFN1-201ENST00000248668 NCSTNQ92542 709 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 ULK4Q96C45 1275 aa15.47■□□□□ 0.07
LRFN1-201ENST00000248668 NANOGQ9H9S0 305 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms