RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 LMAN1LQ9HAT1 526 aa18.36■□□□□ 0.53
TNFSF9-201ENST00000245817 MID1IP1Q9NPA3 183 aa18.36■□□□□ 0.53
TNFSF9-201ENST00000245817 MBNL1Q9NR56 388 aaKnown RBP18.36■□□□□ 0.53
TNFSF9-201ENST00000245817 ARL15Q9NXU5 204 aa18.36■□□□□ 0.53
TNFSF9-201ENST00000245817 TMEM98Q9Y2Y6 226 aa18.36■□□□□ 0.53
TNFSF9-201ENST00000245817 LRRC72A6NJI9 287 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 UBOX5O94941 541 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 CHRNB1P11230 501 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 MAP4P27816 1152 aaKnown RBP18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 MAT2AP31153 395 aaKnown RBP18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 CCR3P51677 355 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 PCBP2Q15366 365 aaKnown RBP eCLIP18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 RBBP7Q16576 425 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 PHKG1Q16816 387 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 TMEM259Q4ZIN3 620 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 CDKL4Q5MAI5 379 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 CRTC3Q6UUV7 619 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 ACAD11Q709F0 780 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 ALYREFQ86V81 257 aaKnown RBP18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 CFAP206Q8IYR0 622 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 TP53I13Q8NBR0 393 aaPredicted RBP18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 OR56A4Q8NGH8 313 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 TEX101Q9BY14 249 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 SEMA4BQ9NPR2 832 aaPredicted RBP18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 CDYLQ9Y232 598 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 TRAF6Q9Y4K3 522 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 ANGPTL3Q9Y5C1 460 aa18.35■□□□□ 0.53
TNFSF9-201ENST00000245817 C17orf113A0A1B0GUU1 675 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 SLC5A10A0PJK1 596 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 TMEM202A6NGA9 273 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 ZNF195O14628 629 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 POP7O75817 140 aaKnown RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 C7P10643 843 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 GABRG2P18507 467 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 TPMTP51580 245 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 FGL2Q14314 439 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 PDCD2Q16342 344 aaPredicted RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 LACTB2Q53H82 288 aaPredicted RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 VWA5B1Q5TIE3 1220 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 Q6ZS52 159 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 MAVSQ7Z434 540 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 CLYBLQ8N0X4 340 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 TCAIMQ8N3R3 496 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 CFAP61Q8NHU2 1237 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 ZNF483Q8TF39 744 aaPredicted RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 SKA1Q96BD8 255 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 LINC00615Q96LM1 132 aaPredicted RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 NSUN5Q96P11 429 aaKnown RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 NUF2Q9BZD4 464 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 WNT16Q9UBV4 365 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 EIF2B4Q9UI10 523 aaKnown RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 PTBP2Q9UKA9 531 aaKnown RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 PCTPQ9UKL6 214 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 GPR89AB7ZAQ6 455 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 H3BM21 787 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 SLC31A1O15431 190 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 GRID2O43424 1007 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 SERPINA6P08185 405 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 GPR89BP0CG08 455 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 TRIM23P36406 574 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 ARL1P40616 181 aaPredicted RBP18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 CDKL1Q00532 357 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 ABRQ12979 859 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 UBXN2BQ14CS0 331 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 SYT13Q7L8C5 426 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 CLNKQ7Z7G1 428 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 LRRTM4Q86VH4 590 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 ASB12Q8WXK4 309 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 DLG3Q92796 817 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 ATP6V1E2Q96A05 226 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 ESAMQ96AP7 390 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 PPP1R36Q96LQ0 422 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 TUBB6Q9BUF5 446 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 TRIM33Q9UPN9 1127 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 PDE10AQ9Y233 779 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 STK38LQ9Y2H1 464 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 OR1A2Q9Y585 309 aa18.34■□□□□ 0.53
TNFSF9-201ENST00000245817 NCOR1O75376 2440 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 GFYI3L273 518 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 E2F3O00716 465 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 FCHO1O14526 889 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 UBFD1O14562 309 aaKnown RBP18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 CCNT2O60583 730 aaKnown RBP18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 LILRB5O75023 590 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 CATP04040 527 aaKnown RBP18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 PREPP48147 710 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 HNMTP50135 292 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 AP1S2P56377 157 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 SH3BP2P78314 561 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 GALNTL6Q49A17 601 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 SLC9B1Q4ZJI4 515 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 SPDYAQ5MJ70 313 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 METTL2BQ6P1Q9 378 aaKnown RBP18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 SLC22A15Q8IZD6 547 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 OR2T34Q8NGX1 318 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 OR2L2Q8NH16 312 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 HM13Q8TCT9 377 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 RHBDF1Q96CC6 855 aa18.33■□□□□ 0.52
TNFSF9-201ENST00000245817 NELL2Q99435 816 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms