RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 LIPIQ6XZB0 460 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 SFRP1Q8N474 314 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 FAM156AQ8NDB6 213 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 DDHD1Q8NEL9 900 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 ROPN1LQ96C74 230 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 TEX37Q96LM6 180 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 FAM83CQ9BQN1 747 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 SPAG4Q9NPE6 437 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 RAD18Q9NS91 495 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 TMEM181Q9P2C4 612 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 NDUFAF1Q9Y375 327 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 C5orf42Q9H799 3197 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 HEPACAM2A8MVW5 462 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 K7EPI3 171 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 MAP3K7O43318 606 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 TCN1P20061 433 aaPredicted RBP18.13■□□□□ 0.49
HOXC11-201ENST00000243082 METAP1P53582 386 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 GRIN2CQ14957 1233 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 CDKL4Q5MAI5 379 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 PLEKHS1Q5SXH7 462 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 CHCHD4Q8N4Q1 142 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 PCYOX1LQ8NBM8 494 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 ASB11Q8WXH4 323 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 ZSCAN5AQ9BUG6 496 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 SLC12A9Q9BXP2 914 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 CD300AQ9UGN4 299 aa18.13■□□□□ 0.49
HOXC11-201ENST00000243082 CFAP99D6REC4 459 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 ANXA5P08758 320 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 MPC1LP0DKB6 136 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 ABRAXAS2Q15018 415 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 ZNF648Q5T619 568 aaPredicted RBP18.12■□□□□ 0.49
HOXC11-201ENST00000243082 UBE2R2Q712K3 238 aaPredicted RBP18.12■□□□□ 0.49
HOXC11-201ENST00000243082 BHLHE22Q8NFJ8 381 aaPredicted RBP18.12■□□□□ 0.49
HOXC11-201ENST00000243082 LRCH3Q96II8 777 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 GPATCH1Q9BRR8 931 aaKnown RBP18.12■□□□□ 0.49
HOXC11-201ENST00000243082 SLC39A3Q9BRY0 314 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 C1orf50Q9BV19 199 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 DEC1Q9P2X7 70 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 SUCOQ9UBS9 1254 aaKnown RBP18.12■□□□□ 0.49
HOXC11-201ENST00000243082 ITM2BQ9Y287 266 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 ANGPTL3Q9Y5C1 460 aa18.12■□□□□ 0.49
HOXC11-201ENST00000243082 PRORSD1PA6NEY8 169 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 KPNA3O00505 521 aaPredicted RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 SYNCRIPO60506 623 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 STK16O75716 305 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 AP2A2O94973 939 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 HLA-EP13747 358 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 CDKL1Q00532 357 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 BOP1Q14137 746 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 ZXDCQ2QGD7 858 aaPredicted RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 ATP6AP1LQ52LC2 224 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 PDCD4Q53EL6 469 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 RARS2Q5T160 578 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 C9orf64Q5T6V5 341 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 ERAP2Q6P179 960 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 SFTPA1Q8IWL2 248 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 FNDC5Q8NAU1 212 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 TSPEARQ8WU66 669 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 BTN2A2Q8WVV5 523 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 TIFAQ96CG3 184 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 ASB9Q96DX5 294 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 HBEGFQ99075 208 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 NTMT1Q9BV86 223 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 PARVBQ9HBI1 364 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 MRPL40Q9NQ50 206 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 ARL15Q9NXU5 204 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 BCAP29Q9UHQ4 241 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 CCL27Q9Y4X3 112 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 LSM1O15116 133 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 SPINT1O43278 529 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 C8GP07360 202 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 ENO2P09104 434 aaPredicted RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 ELFN1P0C7U0 828 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 MSH3P20585 1137 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 HMOX2P30519 316 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 GGT5P36269 586 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 UFM1P61960 85 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 TRIM25Q14258 630 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 HNRNPA1L2Q32P51 320 aaKnown RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 BEND7Q8N7W2 519 aaPredicted RBP18.11■□□□□ 0.49
HOXC11-201ENST00000243082 HPS4Q9NQG7 708 aa18.11■□□□□ 0.49
HOXC11-201ENST00000243082 GFYI3L273 518 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 ANGPT2O15123 496 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 SLC22A3O75751 556 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 PRNPP04156 253 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 EPB42P16452 691 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 FCARP24071 287 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 ATXN3P54252 364 aaPredicted RBP18.1■□□□□ 0.49
HOXC11-201ENST00000243082 MRPS22P82650 360 aaKnown RBP18.1■□□□□ 0.49
HOXC11-201ENST00000243082 RCAN2Q14206 197 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 ZNF284Q2VY69 593 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 FNDC3BQ53EP0 1204 aaKnown RBP18.1■□□□□ 0.49
HOXC11-201ENST00000243082 COQ5Q5HYK3 327 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 GET4Q7L5D6 327 aaPredicted RBP18.1■□□□□ 0.49
HOXC11-201ENST00000243082 SPDL1Q96EA4 605 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 VPS35Q96QK1 796 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 ZNF184Q99676 751 aaPredicted RBP18.1■□□□□ 0.49
HOXC11-201ENST00000243082 TRPV4Q9HBA0 871 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 HEBP1Q9NRV9 189 aa18.1■□□□□ 0.49
HOXC11-201ENST00000243082 PSMD13Q9UNM6 376 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms