RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 PNPLA2Q96AD5 504 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 CLIP3Q96DZ5 547 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 RANBP9Q96S59 729 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 ZSCAN5AQ9BUG6 496 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 FAM8A1Q9UBU6 413 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 TTC7AQ9ULT0 858 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-201ENST00000242776 ABCA12Q86UK0 2595 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 CSMD1Q96PZ7 3565 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 KCNK1O00180 336 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 URI1O94763 535 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 CBX6O95503 412 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 FGGP02679 453 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 KLK3P07288 261 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 LPOP22079 712 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 PAFAH1B1P43034 410 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 RPL26P61254 145 aaKnown RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 DYNLT1P63172 113 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ATP1A4Q13733 1029 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ELOAQ14241 798 aaKnown RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 PAFAH1B3Q15102 231 aaKnown RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 LONRF2Q1L5Z9 754 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ALG1LQ6GMV1 187 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 DUS1LQ6P1R4 473 aaKnown RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 TRAM1L1Q8N609 369 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ADAMTS17Q8TE56 1095 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 P3H4Q92791 437 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 HEMGNQ9BXL5 484 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ADGRE3Q9BY15 652 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 IMP3Q9NV31 184 aaKnown RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 EPHA6Q9UF33 1036 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 RPL26L1Q9UNX3 145 aaKnown RBP13.46□□□□□ -0.25
DDX39A-201ENST00000242776 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
DDX39A-201ENST00000242776 GOLGA6L10A0A0M3HER8 536 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 RGSL1A5PLK6 1076 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 WIPF3A6NGB9 483 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 APOC4-APOC2K7ER74 178 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 CEACAM4O75871 244 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 APOC2P02655 101 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 BPIP17213 487 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 VCLP18206 1134 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 CES1P23141 567 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 CCNCP24863 283 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 OTX2P32243 289 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 NR2C2P49116 596 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 HSD11B2P80365 405 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 GBE1Q04446 702 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 GTF2H3Q13889 308 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 LLGL1Q15334 1064 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 RPE65Q16518 533 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 PTCHD3Q3KNS1 767 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 FAM83HQ6ZRV2 1179 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-201ENST00000242776 TICAM1Q8IUC6 712 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 RBM12BQ8IXT5 1001 aaKnown RBP13.45□□□□□ -0.26
DDX39A-201ENST00000242776 IQCKQ8N0W5 287 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 ZBTB2Q8N680 514 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 PQLC3Q8N755 202 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 PLD5Q8N7P1 536 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 ZNF501Q96CX3 271 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-201ENST00000242776 CAPZA3Q96KX2 299 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 FCRL4Q96PJ5 515 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 FRMD8P1Q9BZ68 369 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-201ENST00000242776 RAB33BQ9H082 229 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 HAUS2Q9NVX0 235 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 HRASLS2Q9NWW9 162 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 TCFL5Q9UL49 500 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 TMPRSS11EQ9UL52 423 aa13.45□□□□□ -0.26
DDX39A-201ENST00000242776 OR6C74A6NCV1 312 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 MASP2O00187 686 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 PPP1R12AO14974 1030 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-201ENST00000242776 VEGFDO43915 354 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 PRF1P14222 555 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 MX2P20592 715 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 GLRBP48167 497 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 TUBB4BP68371 445 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
DDX39A-201ENST00000242776 TMEM115Q12893 351 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-201ENST00000242776 ABRQ12979 859 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 ZBTB17Q13105 803 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 KLF1Q13351 362 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-201ENST00000242776 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 AGAP9Q5VTM2 703 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 IZUMO3Q5VZ72 239 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 ARMC6Q6NXE6 501 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 B4GALNT4Q76KP1 1039 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 C11orf96Q7Z7L8 435 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 LRRC49Q8IUZ0 686 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 RAVER1Q8IY67 606 aaKnown RBP13.44□□□□□ -0.26
DDX39A-201ENST00000242776 NAT14Q8WUY8 206 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 SGSM3Q96HU1 749 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 TTC25Q96NG3 672 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 SLC7A5P2Q9GIP4 190 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 ILKAPQ9H0C8 392 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-201ENST00000242776 HOMER3Q9NSC5 361 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 CDC23Q9UJX2 597 aa13.44□□□□□ -0.26
DDX39A-201ENST00000242776 PCDHGB7Q9Y5F8 929 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms