RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 RSL24D1Q9UHA3 163 aaKnown RBP13.05□□□□□ -0.32
NEK9-201ENST00000238616 TRAF6Q9Y4K3 522 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 WFS1O76024 890 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 ITGA2BP08514 1039 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
NEK9-201ENST00000238616 ANKZF1Q9H8Y5 726 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 GRIN2DO15399 1336 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 H0YGN5 161 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 TM7SF2O76062 418 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 IPO13O94829 963 aaKnown RBP13.05□□□□□ -0.32
NEK9-201ENST00000238616 INHBEP58166 350 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 C9orf57Q5W0N0 161 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 ZNF782Q6ZMW2 699 aaPredicted RBP13.05□□□□□ -0.32
NEK9-201ENST00000238616 ABHD13Q7L211 337 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 PIGZQ86VD9 579 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 TMEM156Q8N614 296 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 TMEM145Q8NBT3 493 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 KBTBD4Q9NVX7 518 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 TBC1D14Q9P2M4 693 aa13.05□□□□□ -0.32
NEK9-201ENST00000238616 TNFRSF11BO00300 401 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 PDCD5O14737 125 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 HOXC6P09630 235 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 HSPA7P48741 367 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 RFTN2Q52LD8 501 aaPredicted RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 RIOX2Q8IUF8 465 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 BAP1Q92560 729 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 TIMM22Q9Y584 194 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 PRAMEF1O95521 474 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 MTHFD1P11586 935 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 DRD4P21917 467 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 DEFA5Q01523 94 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ENPP7Q6UWV6 458 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 PCDH19Q8TAB3 1148 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 CLK4Q9HAZ1 481 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 EIF3KQ9UBQ5 218 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 ZNF69Q9UC07 566 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 PCDHB3Q9Y5E6 796 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 CFAP20Q9Y6A4 193 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 IQGAP1P46940 1657 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 CNTNAP4Q9C0A0 1308 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 RPP14O95059 124 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 HCKP08631 526 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 NCBP2P52298 156 aaKnown RBP eCLIP13.04□□□□□ -0.321e-10■■■□□ 14.8
NEK9-201ENST00000238616 PPP4CP60510 307 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ST3GAL4Q11206 333 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 C6orf52Q5T4I8 152 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 RDH11Q8TC12 318 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ZNF717Q9BY31 904 aaPredicted RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 hCG_2039718K7EN88 272 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 AZGP1P25311 298 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 FLT3LGP49771 235 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ILF3Q12906 894 aaKnown RBP eCLIP13.04□□□□□ -0.32
NEK9-201ENST00000238616 ENPP2Q13822 863 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 INAVAQ3KP66 663 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ZBTB2Q8N680 514 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 SLC39A3Q9BRY0 314 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 BAIAP2Q9UQB8 552 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 HIF3AQ9Y2N7 669 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 E7EQ34 232 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 NDUFS4O43181 175 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 UGT2B11O75310 529 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 FGF1P05230 155 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 TUBG1P23258 451 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 CFL1P23528 166 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.323e-7■■■■■ 27.5
NEK9-201ENST00000238616 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.04□□□□□ -0.32
NEK9-201ENST00000238616 AK5Q9Y6K8 562 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 EME2A4GXA9 379 aaPredicted RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 EML1O00423 815 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 OR4Q2P0C623 313 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 IFI30P13284 250 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ARCN1P48444 511 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 ELP6Q0PNE2 266 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 MED27Q6P2C8 311 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 SDR16C5Q8N3Y7 309 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 ZNF565Q8N9K5 539 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 B3GALT6Q96L58 329 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 EBNA1BP2Q99848 306 aaKnown RBP13.04□□□□□ -0.32
NEK9-201ENST00000238616 GORASP1Q9BQQ3 440 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 GRHL1Q9NZI5 618 aa13.04□□□□□ -0.32
NEK9-201ENST00000238616 A0A0G2JN53 185 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 CDKN1CP49918 316 aaPredicted RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 TRIM28Q13263 835 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 GDF6Q6KF10 455 aaPredicted RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 TMEM220Q6QAJ8 160 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms