RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SPON1Q9HCB6 807 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 TECPR2O15040 1411 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 HAGHLQ6PII5 290 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 MSANTD1Q6ZTZ1 278 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 LINGO2Q7L985 606 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 VGLL2Q8N8G2 317 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 PCSK9Q8NBP7 692 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 TSEN15Q8WW01 171 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 TMEM209Q96SK2 561 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 COMMD4Q9H0A8 199 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 BRD9Q9H8M2 597 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 DIP2AQ14689 1571 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MCIDASD6RGH6 385 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SLC25A12O75746 678 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MC4RP32245 332 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CXCR3P49682 368 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ATP4BP51164 291 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 EIPR1Q53HC9 387 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 GPR158Q5T848 1215 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CLEC6AQ6EIG7 209 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MON1AQ86VX9 555 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 C7orf43Q8WVR3 580 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 FARSBQ9NSD9 589 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SLC9A3R1O14745 358 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 GABRDO14764 452 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 AURKAO14965 403 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 HTRA2O43464 458 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 DFNA5O60443 496 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 GLUD2P49448 558 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 IKBKEQ14164 716 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 FSTL5Q8N475 847 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 DENND6BQ8NEG7 585 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 IRGQQ8WZA9 623 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 EBF4Q9BQW3 602 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SPATC1LQ9H0A9 340 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 C11orf16Q9NQ32 467 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ZNF282Q9UDV7 671 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 NDUFB5O43674 189 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 XKR5Q6UX68 686 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 BAIAP2L2Q6UXY1 529 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ANKRD13BQ86YJ7 626 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 PGBD3Q8N328 593 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 BEND7Q8N7W2 519 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 TTLL2Q9BWV7 592 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CREB1P16220 341 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 IMPDH1P20839 514 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ABL2P42684 1182 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 PEX6Q13608 980 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SAMD14Q8IZD0 417 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 PKP2Q99959 881 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 IFT27Q9BW83 186 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 IFT46Q9NQC8 304 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 RUVBL1Q9Y265 456 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 MRPS33Q9Y291 106 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 SPATA31D1Q6ZQQ2 1576 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 FAM159BA6NKW6 160 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MATN1P21941 496 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 AQP1P29972 269 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 HNRNPFP52597 415 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 PRR5P85299 388 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ATP6AP1Q15904 470 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 C15orf52Q6ZUT6 534 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 NCSTNQ92542 709 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MRIQ9BWK5 157 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SGK2Q9HBY8 427 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 HPF1Q9NWY4 346 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MST1RQ04912 1400 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 PTPRJQ12913 1337 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SPTLC1O15269 473 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SH3BGRLO75368 114 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SFT2D3Q587I9 215 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 SLC30A10Q6XR72 485 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 PLEKHH3Q7Z736 793 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 C17orf64Q86WR6 236 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 OR10G2Q8NGC3 310 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 AARSD1Q9BTE6 412 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 LGR4Q9BXB1 951 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CIPCQ9C0C6 399 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 A0A1W2PPW3 197 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CSDE1O75534 798 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 DNASE1L3Q13609 305 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CYP4V2Q6ZWL3 525 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 SMG7Q92540 1137 aaKnown RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 NR4A3Q92570 626 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CGREF1Q99674 301 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ARHGEF4Q9NR80 690 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 TSPOAP1O95153 1857 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 LOC100130705A0A1B0GUX0 176 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MXD1Q05195 221 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ZFPM1Q8IX07 1006 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 THAP6Q8TBB0 222 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 RAET1EQ8TD07 263 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 DNAJB3Q8WWF6 145 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 MYO19Q96H55 970 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 ZNF641Q96N77 438 aaPredicted RBP8.1□□□□□ -1.11
APOB-201ENST00000233242 TRIM36Q9NQ86 728 aa8.1□□□□□ -1.11
APOB-201ENST00000233242 CDH10Q9Y6N8 788 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms