RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 NELL2Q99435 816 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 P2RY13Q9BPV8 354 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 ZSCAN5AQ9BUG6 496 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 SLC25A23Q9BV35 468 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 MRPL1Q9BYD6 325 aaKnown RBP10.49□□□□□ -0.73
CDCA3-201ENST00000229265 TNKS2Q9H2K2 1166 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 FAM83DQ9H4H8 585 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 DENND2DQ9H6A0 471 aaPredicted RBP10.49□□□□□ -0.73
CDCA3-201ENST00000229265 WDR55Q9H6Y2 383 aaPredicted RBP10.49□□□□□ -0.73
CDCA3-201ENST00000229265 ELOVL2Q9NXB9 296 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 STX18Q9P2W9 335 aaKnown RBP10.49□□□□□ -0.73
CDCA3-201ENST00000229265 DEC1Q9P2X7 70 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 SLCO3A1Q9UIG8 710 aa10.49□□□□□ -0.73
CDCA3-201ENST00000229265 PTBP2Q9UKA9 531 aaKnown RBP10.49□□□□□ -0.73
CDCA3-201ENST00000229265 ADAMTS9Q9P2N4 1935 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 A0A088AWK7 358 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 SERTM1A2A2V5 107 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 NEMP2A6NFY4 417 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 NPIPB15A6NHN6 443 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-201ENST00000229265 SUPT3HB4E1H0 165 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 BTN3A1O00481 513 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 OR1I1O60431 355 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 KATNA1O75449 491 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 SUPT3HO75486 399 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 MATN4O95460 622 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 OTCP00480 354 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 C8GP07360 202 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 ATP1B2P14415 290 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-201ENST00000229265 TIMP2P16035 220 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 VCLP18206 1134 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 LBPP18428 481 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 WASP42768 502 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 CTSOP43234 321 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-201ENST00000229265 CDKN1CP49918 316 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-201ENST00000229265 ELP6Q0PNE2 266 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 SP140Q13342 867 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 UBAP2LQ14157 1087 aaKnown RBP10.48□□□□□ -0.73
CDCA3-201ENST00000229265 GBX1Q14549 363 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 SF3A2Q15428 464 aaKnown RBP10.48□□□□□ -0.73
CDCA3-201ENST00000229265 C2orf27AQ580R0 203 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 CMPK2Q5EBM0 449 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 LDLRAP1Q5SW96 308 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 KIAA1211LQ6NV74 962 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 ERAP2Q6P179 960 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 PRR23BQ6ZRT6 265 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 DPPA4Q7L190 304 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 ZNF765Q7L2R6 523 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 DSG4Q86SJ6 1040 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 PIM3Q86V86 326 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 TMEM126BQ8IUX1 230 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 PGAM4Q8N0Y7 254 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 ZBTB2Q8N680 514 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 GPR26Q8NDV2 337 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 RLN3Q8WXF3 142 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 STMN2Q93045 179 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 RAB7BQ96AH8 199 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 ROPN1LQ96C74 230 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 LINGO1Q96FE5 620 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 KLHL32Q96NJ5 620 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 HOPXQ9BPY8 73 aaPredicted RBP10.48□□□□□ -0.73
CDCA3-201ENST00000229265 HGH1Q9BTY7 390 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 THTPAQ9BU02 230 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 NTMT1Q9BV86 223 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 TPSD1Q9BZJ3 242 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 MID1IP1Q9NPA3 183 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 RIC8BQ9NVN3 520 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 CD274Q9NZQ7 290 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 SARDHQ9UL12 918 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 NDUFAF1Q9Y375 327 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 LRRC42Q9Y546 428 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 PCDHGA2Q9Y5H1 932 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 DNAJC15Q9Y5T4 150 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 CEP192Q8TEP8 1941 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 NCOR2Q9Y618 2525 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 THADAQ6YHU6 1953 aa10.48□□□□□ -0.73
CDCA3-201ENST00000229265 WDFY3Q8IZQ1 3526 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 LOC100653049A0A140TA62 436 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 EDDM13A0A1B0GTR0 161 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 KLHL33A6NCF5 533 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 UPK3BL1B0FP48 263 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 UPK3BL2E5RIL1 263 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 E9PBE3 544 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 UBXN8O00124 270 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 PSMD12O00232 456 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-201ENST00000229265 UBFD1O14562 309 aaKnown RBP10.47□□□□□ -0.73
CDCA3-201ENST00000229265 NUAK1O60285 661 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 KLHL41O60662 606 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 NIPSNAP2O75323 286 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 KRT34O76011 436 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 WDR47O94967 919 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 FTH1P02794 183 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 SNRPB2P08579 225 aaKnown RBP10.47□□□□□ -0.73
CDCA3-201ENST00000229265 HIST1H2AGP0C0S8 130 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-201ENST00000229265 EBLN1P0CF75 366 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 IDO1P14902 403 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 HIST1H2ADP20671 130 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 XPAP23025 273 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-201ENST00000229265 EEF1DP29692 281 aaKnown RBP10.47□□□□□ -0.73
CDCA3-201ENST00000229265 MTTPP55157 894 aa10.47□□□□□ -0.73
CDCA3-201ENST00000229265 AP1S2P56377 157 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms