RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 FAM192AQ9GZU8 254 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 SMG9Q9H0W8 520 aaKnown RBP16.56■□□□□ 0.24
GAPDH-201ENST00000229239 GIMAP2Q9UG22 337 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 ASB1Q9Y576 335 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 KANSL1LA0AUZ9 987 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 KPNA5O15131 536 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 DNAJA2O60884 412 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 ENO2P09104 434 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-201ENST00000229239 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
GAPDH-201ENST00000229239 OR56A5P0C7T3 313 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 BMP1P13497 986 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 CA5AP35218 305 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 VASPP50552 380 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-201ENST00000229239 DIO3P55073 304 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 ERVFC1P60507 584 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 PTSQ03393 145 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 COL19A1Q14993 1142 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 KIAA0907Q7Z7F0 614 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-201ENST00000229239 CLDN19Q8N6F1 224 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 KIAA1958Q8N8K9 716 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 FAM156AQ8NDB6 213 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 IGFLR1Q9H665 355 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 IPPKQ9H8X2 491 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 COPS7BQ9H9Q2 264 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-201ENST00000229239 SPHK2Q9NRA0 654 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 MARK1Q9P0L2 795 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 CCL26Q9Y258 94 aa16.56■□□□□ 0.24
GAPDH-201ENST00000229239 NEDD8-MDP1E9PL57 170 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 FXYD1O00168 92 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 AP1G1O43747 822 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 SYNCRIPO60506 623 aaKnown RBP16.55■□□□□ 0.24
GAPDH-201ENST00000229239 MOSPD3O75425 235 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 CAPN1P07384 714 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 CYP2A6P11509 494 aaPredicted RBP16.55■□□□□ 0.24
GAPDH-201ENST00000229239 HMOX2P30519 316 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 RECQLP46063 649 aaPredicted RBP16.55■□□□□ 0.24
GAPDH-201ENST00000229239 CDKL1Q00532 357 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 RALGDSQ12967 914 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 TRAF3Q13114 568 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 PRKG2Q13237 762 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 INPP5AQ14642 412 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 TEAD2Q15562 447 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 EML3Q32P44 896 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 PDE12Q6L8Q7 609 aaKnown RBP16.55■□□□□ 0.24
GAPDH-201ENST00000229239 GDPD4Q6W3E5 623 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 DPY19L3Q6ZPD9 716 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 Q6ZSR9 355 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 MILR1Q7Z6M3 343 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 MARVELD2Q8N4S9 558 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 TMEM102Q8N9M5 508 aaPredicted RBP16.55■□□□□ 0.24
GAPDH-201ENST00000229239 SNX31Q8N9S9 440 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 FNDC5Q8NAU1 212 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 OR4F6Q8NGB9 312 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 OR2T34Q8NGX1 318 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 OR2T11Q8NH01 316 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 OR2T3Q8NH03 318 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 ESAMQ96AP7 390 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 RHBDF1Q96CC6 855 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 ACOX2Q99424 681 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 EGFL8Q99944 293 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 PKP2Q99959 881 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 PCDHAC1Q9H158 963 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 ZDHHC6Q9H6R6 413 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 BRD9Q9H8M2 597 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 ARMC1Q9NVT9 282 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 SMOXQ9NWM0 555 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 CLDND1Q9NY35 253 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 PKD2L2Q9NZM6 624 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 OPTCQ9UBM4 332 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 TRPS1Q9UHF7 1281 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 ANGPTL3Q9Y5C1 460 aa16.55■□□□□ 0.24
GAPDH-201ENST00000229239 DPPA5A6NC42 116 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 CCDC154A6NI56 674 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 K7EPI3 171 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 SLC28A1O00337 649 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 SLC9A3R1O14745 358 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-201ENST00000229239 TAPBPO15533 448 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 XYLBO75191 536 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 KATNA1O75449 491 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 RHOP08100 348 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 EBLN1P0CF75 366 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 ITGB6P18564 788 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 LHCGRP22888 699 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 SPINT3P49223 89 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 POLR2JP52435 117 aaKnown RBP16.54■□□□□ 0.24
GAPDH-201ENST00000229239 NME5P56597 212 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 ZNF77Q15935 545 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 AASDHQ4L235 1098 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-201ENST00000229239 ADGRD2Q7Z7M1 963 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 SLC15A3Q8IY34 581 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 ST13P4Q8IZP2 240 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-201ENST00000229239 LILRA2Q8N149 483 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 AHI1Q8N157 1196 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 CCDC97Q96F63 343 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-201ENST00000229239 MAGEB10Q96LZ2 347 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-201ENST00000229239 NTMT1Q9BV86 223 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 C8orf4Q9NR00 106 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 HCFC1R1Q9NWW0 138 aa16.54■□□□□ 0.24
GAPDH-201ENST00000229239 WWOXQ9NZC7 414 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms