RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MYL12AP19105 171 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 GLDCP23378 1020 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 PCSK6P29122 969 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 SLC5A2P31639 672 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 IL12RB1P42701 662 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 PARP15Q460N3 678 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 OR4F3Q6IEY1 312 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 SMYD1Q8NB12 490 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 PCSK9Q8NBP7 692 aaKnown RBP13.53□□□□□ -0.24
NFKB1-201ENST00000226574 STON2Q8WXE9 905 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 NELL1Q92832 810 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 IL4I1Q96RQ9 567 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
NFKB1-201ENST00000226574 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 ERGIC3Q9Y282 383 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 ALDH1A2O94788 518 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 IL6P05231 212 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 ASGR1P07306 291 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 OXTRP30559 389 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 RPS3AP61247 264 aaKnown RBP13.53□□□□□ -0.24
NFKB1-201ENST00000226574 SFSWAPQ12872 951 aaKnown RBP13.53□□□□□ -0.24
NFKB1-201ENST00000226574 ANGPT1Q15389 498 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 C6orf136Q5SQH8 315 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 FAM219BQ5XKK7 198 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 TAPT1Q6NXT6 567 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 MSANTD2Q6P1R3 559 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 RD3Q7Z3Z2 195 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 TMPRSS11BQ86T26 416 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 AADATQ8N5Z0 425 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 C3orf30Q96M34 536 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 CD320Q9NPF0 282 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 PCDHGA7Q9Y5G6 932 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 COL1A2P08123 1366 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 FAM234BA2RU67 622 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 SLC22A2O15244 555 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 DENRO43583 198 aaKnown RBP13.53□□□□□ -0.24
NFKB1-201ENST00000226574 RPS14P62263 151 aaKnown RBP13.53□□□□□ -0.24
NFKB1-201ENST00000226574 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
NFKB1-201ENST00000226574 FOXB2Q5VYV0 432 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 RTP4Q96DX8 246 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 KCNC2Q96PR1 638 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 BRD9Q9H8M2 597 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 MIOSQ9NXC5 875 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 DNAJB9Q9UBS3 223 aa13.53□□□□□ -0.24
NFKB1-201ENST00000226574 ZNF99A8MXY4 864 aaPredicted RBP13.52□□□□□ -0.24
NFKB1-201ENST00000226574 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.24
NFKB1-201ENST00000226574 CLDN9O95484 217 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 PRDX3P30048 256 aaKnown RBP13.52□□□□□ -0.24
NFKB1-201ENST00000226574 SLC26A3P40879 764 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 FLT3LGP49771 235 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 ZNF829Q3KNS6 432 aaPredicted RBP13.52□□□□□ -0.24
NFKB1-201ENST00000226574 PYDC2Q56P42 97 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 CPTPQ5TA50 214 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 MFSD4BQ5TF39 518 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 SULT1C3Q6IMI6 304 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.24
NFKB1-201ENST00000226574 MYDGFQ969H8 173 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 TP53INP1Q96A56 240 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 NAA50Q9GZZ1 169 aaKnown RBP13.52□□□□□ -0.24
NFKB1-201ENST00000226574 MFSD1Q9H3U5 465 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 ATP13A3Q9H7F0 1226 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.24
NFKB1-201ENST00000226574 SAMD4AQ9UPU9 718 aaKnown RBP13.52□□□□□ -0.24
NFKB1-201ENST00000226574 IGKV6-21A0A0C4DH24 114 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 EFCAB9A8MZ26 197 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 PLOD2O00469 737 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 PER2O15055 1255 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF12P17014 697 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 MAP2K4P45985 399 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 GANABQ14697 944 aaKnown RBP13.52□□□□□ -0.25
NFKB1-201ENST00000226574 USP45Q70EL2 814 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 LYSMD3Q7Z3D4 306 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 MYO19Q96H55 970 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 TFB2MQ9H5Q4 396 aaKnown RBP13.52□□□□□ -0.25
NFKB1-201ENST00000226574 RRAGCQ9HB90 399 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 TCRBV5S1A1TA0A578 114 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 A8MV72 311 aaPredicted RBP13.52□□□□□ -0.25
NFKB1-201ENST00000226574 LOC730098B7Z3J9 87 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 TNFRSF11BO00300 401 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 GPR39O43194 453 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 ACSL4O60488 711 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 PLOD3O60568 738 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 PSIP1O75475 530 aaKnown RBP13.52□□□□□ -0.25
NFKB1-201ENST00000226574 IL10RBQ08334 325 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 C18orf21Q32NC0 220 aaPredicted RBP13.52□□□□□ -0.25
NFKB1-201ENST00000226574 SLC22A16Q86VW1 577 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 CYP4Z1Q86W10 505 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 ARMC8Q8IUR7 673 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 PIH1D2Q8WWB5 315 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 TMEM203Q969S6 136 aa13.52□□□□□ -0.25
NFKB1-201ENST00000226574 CCM2LQ9NUG4 571 aaPredicted RBP13.52□□□□□ -0.25
NFKB1-201ENST00000226574 INTS10Q9NVR2 710 aaKnown RBP13.52□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF624Q9P2J8 865 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms