RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 ILF3Q12906 894 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 C16orf46Q6P387 395 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 LVRNQ6Q4G3 990 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 PIWIL4Q7Z3Z4 852 aaKnown RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 PHACTR4Q8IZ21 702 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 SLC22A15Q8IZD6 547 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 FSTL5Q8N475 847 aaPredicted RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 CEP76Q8TAP6 659 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 STAG3L4Q8TBR4 150 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 KIAA1191Q96A73 305 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 GPR78Q96P69 363 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 UNKQ9C0B0 810 aaKnown RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 MRPL46Q9H2W6 279 aaKnown RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 TSR3Q9UJK0 312 aaKnown RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 RAB23Q9ULC3 237 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 CDYLQ9Y232 598 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 KCNK6Q9Y257 313 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 ZBTB14O43829 449 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 PLIN3O60664 434 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 CSF2P04141 144 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 C8GP07360 202 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 CTBSQ01459 385 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 HHATQ5VTY9 493 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 CYHR1Q6ZMK1 362 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 FAM83HQ6ZRV2 1179 aaPredicted RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 ADAMTSL2Q86TH1 951 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 ISCA2Q86U28 154 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 SPATS2Q86XZ4 545 aaKnown RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 VRK3Q8IV63 474 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 SPNS2Q8IVW8 549 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 LILRA3Q8N6C8 439 aaPredicted RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 RHEBL1Q8TAI7 183 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 LOXL4Q96JB6 756 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 FAM111AQ96PZ2 611 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 GSDMCQ9BYG8 508 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 TMEM168Q9H0V1 697 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 ALG9Q9H6U8 611 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 SLC17A7Q9P2U7 560 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 APOBEC3BQ9UH17 382 aaKnown RBP16.22■□□□□ 0.19
CHMP5-201ENST00000223500 PLEKHM1Q9Y4G2 1056 aa16.22■□□□□ 0.19
CHMP5-201ENST00000223500 A0A1B0GVT2 93 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 PABPN1LA6NDY0 278 aaKnown RBP16.21■□□□□ 0.19
CHMP5-201ENST00000223500 SYCE1LA8MT33 242 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 IFRD1O00458 451 aaPredicted RBP16.21■□□□□ 0.19
CHMP5-201ENST00000223500 SCAMP1O15126 338 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 SLC16A5O15375 505 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 PROCP04070 461 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 SLC35G4P0C7Q5 338 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 NME1P15531 152 aaKnown RBP16.21■□□□□ 0.19
CHMP5-201ENST00000223500 HNRNPKP61978 463 aaKnown RBP eCLIP16.21■□□□□ 0.191e-9■■■□□ 18.9
CHMP5-201ENST00000223500 ABRQ12979 859 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 MPP2Q14168 576 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 TSNQ15631 228 aaKnown RBP16.21■□□□□ 0.19
CHMP5-201ENST00000223500 DUOXA1Q1HG43 343 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 TECRLQ5HYJ1 363 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 PEAR1Q5VY43 1037 aaPredicted RBP16.21■□□□□ 0.19
CHMP5-201ENST00000223500 ARMC2Q8NEN0 867 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 MGARPQ8TDB4 240 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 TRIM54Q9BYV2 358 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 ERVMER34-1Q9H9K5 563 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 TMEM74BQ9NUR3 256 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 XPR1Q9UBH6 696 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 PNMA8BQ9ULN7 279 aaPredicted RBP16.21■□□□□ 0.19
CHMP5-201ENST00000223500 RNF112Q9ULX5 631 aa16.21■□□□□ 0.19
CHMP5-201ENST00000223500 ARHGEF17Q96PE2 2063 aaPredicted RBP16.2■□□□□ 0.18
CHMP5-201ENST00000223500 NPEPPSL1A6NEC2 478 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 PDZK1P1A8MUH7 402 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 CDC7O00311 574 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 CATP04040 527 aaKnown RBP16.2■□□□□ 0.18
CHMP5-201ENST00000223500 TAC1P20366 129 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 PDHA2P29803 388 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 ACTR1BP42025 376 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 ACTR1AP61163 376 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 IRX4P78413 519 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 SP140Q13342 867 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 FRA10AC1Q70Z53 315 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 PDZD3Q86UT5 571 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 RDH11Q8TC12 318 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 GPBAR1Q8TDU6 330 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 DENND1AQ8TEH3 1009 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 ASB11Q8WXH4 323 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 PTERQ96BW5 349 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 PAIP2Q9BPZ3 127 aaKnown RBP16.2■□□□□ 0.18
CHMP5-201ENST00000223500 LRFN3Q9BTN0 628 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 OR52A5Q9H2C5 316 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 SPASTQ9UBP0 616 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 KLF15Q9UIH9 416 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 EMCNQ9ULC0 261 aa16.2■□□□□ 0.18
CHMP5-201ENST00000223500 PRR19A6NJB7 356 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 SNX2O60749 519 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 KERAO60938 352 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 MATN4O95460 622 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 CHN1P15882 459 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 CYP2A7P20853 494 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 AK4P27144 223 aaPredicted RBP16.19■□□□□ 0.18
CHMP5-201ENST00000223500 MAP4P27816 1152 aaKnown RBP16.19■□□□□ 0.18
CHMP5-201ENST00000223500 HALP42357 657 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 CTSKP43235 329 aa16.19■□□□□ 0.18
CHMP5-201ENST00000223500 ATP1A2P50993 1020 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms