RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 GSDMCQ9BYG8 508 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 ITM2CQ9NQX7 267 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 C1orf109Q9NX04 203 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 DTLQ9NZJ0 730 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 CLCA3PQ9Y6N3 262 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 HOXB2P14652 356 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 CBX5P45973 191 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 AAK1Q2M2I8 961 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 SLC35G5Q96KT7 338 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 ZSCAN5AQ9BUG6 496 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 MUC13Q9H3R2 512 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 PLEKHA1Q9HB21 404 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.67■□□□□ 0.58
SMPD3-201ENST00000219334 PDK3Q15120 406 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 GPR151Q8TDV0 419 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 TSEN15Q8WW01 171 aaKnown RBP18.67■□□□□ 0.58
SMPD3-201ENST00000219334 FCRL5Q96RD9 977 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 DMAC2Q9NW81 257 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 GNEQ9Y223 722 aaKnown RBP18.67■□□□□ 0.58
SMPD3-201ENST00000219334 PRODHO43272 600 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 CHST10O43529 356 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 KRT36O76013 467 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 PBX1P40424 430 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 CCR8P51685 355 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 FBXL22Q6P050 247 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 AAGABQ6PD74 315 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 TMEM145Q8NBT3 493 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 SNX33Q8WV41 574 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 ZNF8P17098 575 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 SLC26A3P40879 764 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 ATXN1P54253 815 aaKnown RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 OLR1P78380 273 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 GRASPQ7Z6J2 395 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 OR2AP1Q8NGE2 309 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 CRELD1Q96HD1 420 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 ACSS2Q9NR19 701 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 ZDHHC3Q9NYG2 299 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 REXO2Q9Y3B8 237 aaKnown RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 RSL1D1O76021 490 aaKnown RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 IL7RP16871 459 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 DRD4P21917 467 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 DPYSL2Q16555 572 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 SGCBQ16585 318 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 WDR45BQ5MNZ6 344 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 ABHD13Q7L211 337 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 LRRTM4Q86VH4 590 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 RNF39Q9H2S5 420 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 MCUBQ9NWR8 336 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 NOCTQ9UK39 431 aaKnown RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 ARL5AQ9Y689 179 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 SSNA1O43805 119 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 PIM1P11309 404 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 TRAP1Q12931 704 aaKnown RBP18.66■□□□□ 0.58
SMPD3-201ENST00000219334 SLC30A6Q6NXT4 461 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 COX4I2Q96KJ9 171 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 TCRBV7S2A1N4TA0A589 114 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 MAGEB17A8MXT2 336 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 PSMD11O00231 422 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 MTHFRP42898 656 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 KHKP50053 298 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 SYPL2Q5VXT5 272 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 METTL21CQ5VZV1 264 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 ADGRD1Q6QNK2 874 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 C1GALT1C1Q96EU7 318 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 HIST1H2AAQ96QV6 131 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 IL1RAPQ9NPH3 570 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 SLC2A4RGQ9NR83 387 aa18.66■□□□□ 0.58
SMPD3-201ENST00000219334 PLGP00747 810 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-201ENST00000219334 SLC11A1P49279 550 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 HKDC1Q2TB90 917 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 ANKRD22Q5VYY1 191 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 ARMCX6Q7L4S7 300 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 SETD7Q8WTS6 366 aaKnown RBP18.65■□□□□ 0.58
SMPD3-201ENST00000219334 WNT6Q9Y6F9 365 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 CASKO14936 926 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 ENTPD5O75356 428 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 CYB5AP00167 134 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 IFNA6P05013 189 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 PRKCGP05129 697 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 TMEM192Q8IY95 271 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 HBEGFQ99075 208 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 OSBPL2Q9H1P3 480 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 CNTN3Q9P232 1028 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-201ENST00000219334 TNFRSF21O75509 655 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 KLK3P07288 261 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-201ENST00000219334 NR1H2P55055 460 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 CYP2U1Q7Z449 544 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 KAT2AQ92830 837 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 NUSAP1Q9BXS6 441 aaKnown RBP18.65■□□□□ 0.58
SMPD3-201ENST00000219334 TIPRLO75663 272 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 TCEA3O75764 348 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 PIGRP01833 764 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 ALOX5P09917 674 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 DNASE1L1P49184 302 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 SPPL2CQ8IUH8 684 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 NSMCE3Q96MG7 304 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 ADAP2Q9NPF8 381 aa18.65■□□□□ 0.58
SMPD3-201ENST00000219334 DNAJA2O60884 412 aa18.64■□□□□ 0.58
SMPD3-201ENST00000219334 VNN1O95497 513 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms