RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 Q7L0L9 218 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 OR6Y1Q8NGX8 325 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ALG3Q92685 438 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 MFSD3Q96ES6 412 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 NPAS2Q99743 824 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 FEM1AQ9BSK4 669 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 TAPBPLQ9BX59 468 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 FBRSL1Q9HCM7 1045 aaKnown RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 INTS10Q9NVR2 710 aaKnown RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 SLCO3A1Q9UIG8 710 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 PI15O43692 258 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 C5AR1P21730 350 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 MPSTP25325 297 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 PTGER3P43115 390 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 CCR8P51685 355 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 MLF2Q15773 248 aaPredicted RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 SLC29A4Q7RTT9 530 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 C14orf80Q86SX3 495 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 PACS2Q86VP3 889 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ZMIZ2Q8NF64 920 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 DENND1AQ8TEH3 1009 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 TFGQ92734 400 aaPredicted RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 ELL3Q9HB65 397 aaPredicted RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 THAP1Q9NVV9 213 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 GEMIN8Q9NWZ8 242 aaKnown RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 FAM25AB3EWG3 89 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 FAM25CB3EWG5 89 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 FAM25GB3EWG6 89 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 PTGESO14684 152 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 BTN3A2P78410 334 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 ITIH4Q14624 930 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 CPTPQ5TA50 214 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 ZNF761Q86XN6 746 aaPredicted RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 PRELID2Q8N945 189 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 XAGE5Q8WWM1 108 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 RTP3Q9BQQ7 232 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 BEST1O76090 585 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 CLDN9O95484 217 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 C8GP07360 202 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 MAPKAPK3Q16644 382 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 SLC8B1Q6J4K2 584 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 OR52L1Q8NGH7 329 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 OR10Q1Q8NGQ4 319 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 SLC35F5Q8WV83 523 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 CDADC1Q9BWV3 514 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 SALL4Q9UJQ4 1053 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 RECQL5O94762 991 aaPredicted RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 CDKN2BP42772 138 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 DEF8Q6ZN54 512 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 Q6ZVL8 140 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 MRPL10Q7Z7H8 261 aaKnown RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 AMIGO2Q86SJ2 522 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 GPR180Q86V85 440 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 KYQ8NBH2 561 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 FAM98AQ8NCA5 519 aaKnown RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 PCDH19Q8TAB3 1148 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 MAGEE2Q8TD90 523 aaPredicted RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 NSMCE2Q96MF7 247 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 NOL11Q9H8H0 719 aaKnown RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 TBC1D23Q9NUY8 699 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 EIF4HQ15056 248 aaKnown RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 INTS11Q5TA45 600 aaKnown RBP13.53□□□□□ -0.24
SIX4-201ENST00000216513 TMEM26Q6ZUK4 368 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 TCEAL8Q8IYN2 117 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 RDH11Q8TC12 318 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 IPPKQ9H8X2 491 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 CROTQ9UKG9 612 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 DGKBQ9Y6T7 804 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 USP46P62068 366 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 SIRPB2Q5JXA9 342 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 KLHDC9Q8NEP7 349 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 LRRC46Q96FV0 321 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 KLRF1Q9NZS2 232 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 OR1A2Q9Y585 309 aa13.53□□□□□ -0.24
SIX4-201ENST00000216513 OR6C74A6NCV1 312 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 ENTPD5O75356 428 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 SRPRAP08240 638 aaKnown RBP13.52□□□□□ -0.24
SIX4-201ENST00000216513 KYAT3Q6YP21 454 aaKnown RBP13.52□□□□□ -0.24
SIX4-201ENST00000216513 GPRIN1Q7Z2K8 1008 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 NTAN1Q96AB6 310 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 MPP4Q96JB8 637 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 TMEM216Q9P0N5 145 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 STRCQ7RTU9 1775 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.24
SIX4-201ENST00000216513 MYH13Q9UKX3 1938 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 BCLAF3A2AJT9 711 aaKnown RBP13.52□□□□□ -0.24
SIX4-201ENST00000216513 REM1O75628 298 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 GRIA3P42263 894 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 FAM92BQ6ZTR7 304 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 CAMKVQ8NCB2 501 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 PLA2G15Q8NCC3 412 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms