RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ASIC4Q96FT7 647 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 GLT1D1Q96MS3 346 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF599Q96NL3 588 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 TFB2MQ9H5Q4 396 aaKnown RBP14.83□□□□□ -0.04
EFNB1-201ENST00000204961 AIG1Q9NVV5 245 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 WDR70Q9NW82 654 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 RBMX2Q9Y388 322 aaKnown RBP14.83□□□□□ -0.04
EFNB1-201ENST00000204961 PRUNE2Q8WUY3 3088 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 SYCE1LA8MT33 242 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 AP1G1O43747 822 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 UROSP10746 265 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 BMP2P12643 396 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 CAPGP40121 348 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 SMN1Q16637 294 aaKnown RBP14.83□□□□□ -0.04
EFNB1-201ENST00000204961 FUT10Q6P4F1 479 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 ZDHHC13Q8IUH4 622 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 SEPT8Q92599 483 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 TPD52L3Q96J77 140 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 FEM1CQ96JP0 617 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 CGREF1Q99674 301 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 GPATCH1Q9BRR8 931 aaKnown RBP14.83□□□□□ -0.04
EFNB1-201ENST00000204961 RIC8BQ9NVN3 520 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 CLEC4EQ9ULY5 219 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 ATG2BQ96BY7 2078 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 SLC38A8A6NNN8 435 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 SLC22A2O15244 555 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 TACR1P25103 407 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 HOXC13P31276 330 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 MAP2K4P45985 399 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 EIF4EBP2Q13542 120 aaPredicted RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 AFTPHQ6ULP2 937 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF683Q8IZ20 524 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 APCDD1Q8J025 514 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 C2orf73Q8N5S3 287 aaPredicted RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 APOLD1Q96LR9 279 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 INPP5KQ9BT40 448 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 RNF186Q9NXI6 227 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 MBD1Q9UIS9 605 aaPredicted RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 CORINQ9Y5Q5 1042 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 LCHNA4D1U4 455 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 E2F3O00716 465 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 FFAR2O15552 330 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 PBLDP30039 288 aaPredicted RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 ACADVLP49748 655 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF135P52742 658 aaPredicted RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 PARP15Q460N3 678 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 TMTC4Q5T4D3 741 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 AFMIDQ63HM1 303 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 C17orf99Q6UX52 265 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 MRPL10Q7Z7H8 261 aaKnown RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 BCL7CQ8WUZ0 217 aaPredicted RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 BDH2Q9BUT1 245 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 EPB41L1Q9H4G0 881 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 MRM3Q9HC36 420 aaKnown RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 G3V2T6 193 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 PRRG1O14668 218 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF623O75123 536 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 RXRGP48443 463 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 CACUL1Q86Y37 369 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 ERI1Q8IV48 349 aaKnown RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 ANKFN1Q8N957 763 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 LHPPQ9H008 270 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 SCHIP1Q9P0W5 487 aaPredicted RBP14.82□□□□□ -0.04
EFNB1-201ENST00000204961 PCDHGA8Q9Y5G5 932 aa14.82□□□□□ -0.04
EFNB1-201ENST00000204961 INMTO95050 263 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 PAPSS2O95340 614 aaPredicted RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 TNFRSF1BP20333 461 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 RAD23AP54725 363 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 C21orf59P57076 290 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ERVK-8P63133 956 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 MGAT3Q09327 533 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 Q6ZPB1 254 aaPredicted RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 TMEM179BQ7Z7N9 219 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 MINDY1Q8N5J2 469 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 C1orf74Q96LT6 269 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 MTERF1Q99551 399 aaKnown RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ROGDIQ9GZN7 287 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 MTG2Q9H4K7 406 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ELOVL2Q9NXB9 296 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ARL15Q9NXU5 204 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 DNMT3LQ9UJW3 386 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 PCDHB3Q9Y5E6 796 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 TSC2P49815 1807 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 TRIM43BA6NCK2 446 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ULK1O75385 1050 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 SERPINA1P01009 418 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 AKT1P31749 480 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 CSKP41240 450 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF140P52738 457 aaPredicted RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ARSFP54793 590 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 CYP4F2P78329 520 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 CYP4F3Q08477 520 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 SLC36A3Q495N2 470 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 GPR180Q86V85 440 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 SMYD1Q8NB12 490 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 YIPF2Q9BWQ6 316 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 RERGLQ9H628 205 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 PARVBQ9HBI1 364 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms