RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 GREM1O60565 184 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 MLYCDO95822 493 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ESR1P03372 595 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 NUP107P57740 925 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ABRAXAS2Q15018 415 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 NR6A1Q15406 480 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 PYCR3Q53H96 274 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 DGKKQ5KSL6 1271 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 GOLGA7Q7Z5G4 137 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 CMTM8Q8IZV2 173 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 SFRP1Q8N474 314 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 SGCDQ92629 289 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ROPN1LQ96C74 230 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ALG14Q96F25 216 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 PPM1MQ96MI6 270 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 P2RY12Q9H244 342 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ALG2Q9H553 416 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ZNHIT2Q9UHR6 403 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 CRLS1Q9UJA2 301 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 H0YJX3 145 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 H3BMQ9 156 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 GAPDHSO14556 408 aaPredicted RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 FZD6O60353 706 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ACRP10323 421 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 G6PDP11413 515 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ZNF182P17025 639 aaPredicted RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 ATP4BP51164 291 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 POLR2JP52435 117 aaKnown RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 LMAN2Q12907 356 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ATP6AP1LQ52LC2 224 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 RFTN2Q52LD8 501 aaPredicted RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 SBSNQ6UWP8 590 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 DET1Q7L5Y6 550 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 RNF168Q8IYW5 571 aaPredicted RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 LZICQ8WZA0 190 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 COG8Q96MW5 612 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 C9orf16Q9BUW7 83 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 TRIM15Q9C019 465 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ADNPQ9H2P0 1102 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 PLGRKTQ9HBL7 147 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ZFP14Q9HCL3 533 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 MRPL17Q9NRX2 175 aaKnown RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 AIG1Q9NVV5 245 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ELOVL2Q9NXB9 296 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 CD84Q9UIB8 345 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 DHRS7Q9Y394 339 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 STX16O14662 325 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 FFAR2O15552 330 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 FKTNO75072 461 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 KCNH1O95259 989 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 EFEMP2O95967 443 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 BPIP17213 487 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 MYF6P23409 242 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 TUBA4AP68366 448 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 HMGCS1Q01581 520 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 PIGFQ07326 219 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 NFATC2Q13469 925 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 SLC36A3Q495N2 470 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 INO80DQ53TQ3 878 aaPredicted RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 PATL1Q86TB9 770 aaKnown RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 ZNF554Q86TJ5 538 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 KIAA2013Q8IYS2 634 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 BPIFB6Q8NFQ5 453 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 ARMC7Q9H6L4 198 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 RPF2Q9H7B2 306 aaKnown RBP12.91□□□□□ -0.34
CTNS-201ENST00000046640 IL21Q9HBE4 155 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 SLC52A3Q9NQ40 469 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 GID8Q9NWU2 228 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 SUN2Q9UH99 717 aa12.91□□□□□ -0.34
CTNS-201ENST00000046640 A0A1W2PP18 115 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 OR7A17O14581 309 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 ACOX3O15254 700 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 RSL1D1O76021 490 aaKnown RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 POLR2IP36954 125 aaKnown RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 ZFP36L2P47974 494 aaKnown RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 CCT8P50990 548 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 MTPNP58546 118 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 GTF2H2Q13888 395 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 TPGS2Q68CL5 300 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 RETSATQ6NUM9 610 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 GTF2H2CQ6P1K8 395 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 C16orf87Q6PH81 154 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 DNAJC14Q6Y2X3 702 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 SLC39A11Q8N1S5 342 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 PROKR1Q8TCW9 393 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 HOPXQ9BPY8 73 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 C2orf49Q9BVC5 232 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 MRGBPQ9NV56 204 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 HACD3Q9P035 362 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 INTS6Q9UL03 887 aaKnown RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 POLR3HQ9Y535 204 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 ANGPTL3Q9Y5C1 460 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 NPIPB15A6NHN6 443 aaPredicted RBP12.9□□□□□ -0.34
CTNS-201ENST00000046640 BBIP1A8MTZ0 92 aa12.9□□□□□ -0.34
CTNS-201ENST00000046640 MTX2O75431 263 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms