RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Extl1Q9JKV7 669 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp831A2ADM8 1628 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr376E9Q4M1 320 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm5724L7N264 670 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Clca4bQ3UW98 925 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm136Q3V037 328 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc22a15Q504N2 544 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sec24dQ6NXL1 1032 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Bmp3Q8BHE5 468 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 4933402J07RikQ8BHX0 270 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Smoc1Q8BLY1 463 aaKnown RBP11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ndufs2Q91WD5 463 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fbxo32Q9CPU7 355 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 4933425L06RikQ9D3Z8 585 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sacm1lQ9EP69 587 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gfra4Q9JJT2 260 aa11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Togaram1Q6A070 1776 aaKnown RBP11.17□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vmn2r1O70410 912 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 LckP06240 509 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cdh3P10287 822 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ctps1P70698 591 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Apex2Q68G58 516 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Skiv2lQ6NZR5 1244 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 GnsQ8BFR4 544 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Map4k5Q8BPM2 847 aaKnown RBP11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nae1Q8VBW6 534 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr1250Q8VGM3 314 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Mrps2Q924T2 291 aaKnown RBP11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gstt3Q99L20 241 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Acer3Q9D099 267 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 5530400C23RikQ9D3I0 173 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nme7Q9QXL8 395 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rdh11Q9QYF1 316 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp646Q6NV66 1788 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vmn2r2L7N2E9 908 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rgs4O08899 205 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rrm2P11157 390 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CartptP56388 129 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ncf4P97369 339 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cdk15Q3V3A1 433 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zmpste24Q80W54 475 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fignl1Q8BPY9 683 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ston2Q8BZ60 895 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 SelenomQ8VHC3 145 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 AmotQ8VHG2 1126 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Klk6Q91Y82 253 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 NwcQ9CQI4 244 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nudt17Q9CWD3 296 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Kat8Q9D1P2 458 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cdkn2aipnlQ9D211 116 aaKnown RBP11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Upk3bl1Q9D701 249 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tmem86aQ9D8N3 241 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cntd1Q9D995 334 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Dnajb9Q9QYI6 222 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nrg4Q9WTX4 115 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Eif2b3B1AUN2 452 aaKnown RBP11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fam151bD3YUE4 279 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Prdm14E9Q3T6 561 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm21915J3QPM7 133 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fkbp7O54998 218 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Trdmt1O55055 415 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 C4bP01029 1738 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Spp1P10923 294 aaKnown RBP11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 FynP39688 537 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Serpina5P70458 405 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pla2g5P97391 137 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp39Q02525 718 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Colec11Q3SXB8 272 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sel1l2Q3V172 688 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Arhgap1Q5FWK3 439 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Arcn1Q5XJY5 511 aaKnown RBP11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nfe2l2Q60795 597 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc23a3Q60850 611 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ppm1nQ8BGL1 404 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gprc5aQ8BHL4 356 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Peli3Q8BXR6 445 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fate1Q8CEK7 99 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gpn2Q8VEJ1 310 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 BC035947B2RQY6 695 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sec14l5B2RXM5 696 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm5152L7N200 190 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Kcnn4O89109 425 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Itgb1P09055 798 aaKnown RBP11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ifrd1P19182 449 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp280bQ505F4 534 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tmem151bQ68FE7 561 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Prrt3Q6PE13 971 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm4922Q8C0N0 497 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Map3k21Q8VDG6 1002 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rnf144aQ925F3 292 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gemin2Q9CQQ4 269 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CutalQ9D1U5 156 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cyb5r1Q9DB73 305 aa11.16□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Spin2gA0A0N4SW15 236 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm13089A2AGW7 455 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ttll8A4Q9F1 832 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Spin2eJ3QNQ0 234 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pcsk2P21661 637 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cdkn2bP55271 130 aa11.15□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rps12P63323 132 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms