RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PLA2G4EQ3MJ16 856 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 TTLL9Q3SXZ7 439 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 LVRNQ6Q4G3 990 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 XKR5Q6UX68 686 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 WASH2PQ6VEQ5 465 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 NEK10Q6ZWH5 1172 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 GKN2Q86XP6 184 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 NRROSQ86YC3 692 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 NKAPQ8N5F7 415 aaKnown RBP12.08□□□□□ -0.48
LINC00339-213ENST00000642137 SIDT2Q8NBJ9 832 aaKnown RBP12.08□□□□□ -0.48
LINC00339-213ENST00000642137 CCL4L1Q8NHW4 92 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 ACMSDQ8TDX5 336 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 TMEM159Q96B96 161 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 PGM2Q96G03 612 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 PDLIM5Q96HC4 596 aaKnown RBP12.08□□□□□ -0.48
LINC00339-213ENST00000642137 CABS1Q96KC9 395 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 SLC30A3Q99726 388 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 GAREM1Q9H706 876 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 CAB39LQ9H9S4 337 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 GPAMQ9HCL2 828 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 WASH6PQ9NQA3 447 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 TLK1Q9UKI8 766 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 PCOLCE2Q9UKZ9 415 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 CDYLQ9Y232 598 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 DNAJC16Q9Y2G8 782 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 ACOT9Q9Y305 439 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 ST14Q9Y5Y6 855 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 PCDH15Q96QU1 1955 aa12.08□□□□□ -0.48
LINC00339-213ENST00000642137 A0A087X1B8 175 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 NEMP2A6NFY4 417 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 TPP1O14773 563 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 SCAMP1O15126 338 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 RGS16O15492 202 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-213ENST00000642137 AQP9O43315 295 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 RFPL1O75677 317 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 MPC1LP0DKB6 136 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ENO3P13929 434 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ENGP17813 658 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 KRT15P19012 456 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 AK4P27144 223 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ATP5DP30049 168 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ACTR1BP42025 376 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 RGS4P49798 205 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 IL2P60568 153 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ACTR1AP61163 376 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 HSPA14Q0VDF9 509 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 C1orf61Q13536 156 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 BOP1Q14137 746 aaKnown RBP12.07□□□□□ -0.48
LINC00339-213ENST00000642137 CCDC6Q16204 474 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ACSBG2Q5FVE4 666 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 TNFAIP8L3Q5GJ75 292 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 AGAP9Q5VTM2 703 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 CAPRIN2Q6IMN6 1127 aaKnown RBP12.07□□□□□ -0.48
LINC00339-213ENST00000642137 LRRC8EQ6NSJ5 796 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 TMEM207Q6UWW9 146 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ABRAXAS1Q6UWZ7 409 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 NAPRTQ6XQN6 538 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 CYHR1Q6ZMK1 362 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 FAM83HQ6ZRV2 1179 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-213ENST00000642137 RAPH1Q70E73 1250 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 TAF8Q7Z7C8 310 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 CMC1Q7Z7K0 106 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 LMX1AQ8TE12 382 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 GLMNQ92990 594 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 FAM136AQ96C01 138 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 UBXN10Q96LJ8 280 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 LRRC61Q9BV99 259 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 ACBD3Q9H3P7 528 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 TMBIM4Q9HC24 238 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 FSCN3Q9NQT6 498 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 SNX15Q9NRS6 342 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 KCNK6Q9Y257 313 aa12.07□□□□□ -0.48
LINC00339-213ENST00000642137 KNL1Q8NG31 2342 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 A0A096LPK6 155 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 A0A1W2PPM1 405 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 GOLGA6L10A6NI86 522 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 OR5K4A6NMS3 321 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 LMO7DNF2Z398 122 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 PHGDHO43175 533 aaKnown RBP12.06□□□□□ -0.48
LINC00339-213ENST00000642137 OPA1O60313 960 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SASH3O75995 380 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 MYZAPP0CAP1 466 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 ZNF883P0CG24 379 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 COL6A2P12110 1019 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 ZNF37AP17032 561 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-213ENST00000642137 PDHA2P29803 388 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 PGGT1BP53609 377 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 CSRP2Q16527 193 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 UAP1L1Q3KQV9 507 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SYTL3Q4VX76 610 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 TAF1BQ53T94 588 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SH2D5Q6ZV89 423 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 TRABD2AQ86V40 505 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 PIM3Q86V86 326 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 CPNE9Q8IYJ1 553 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SLC22A15Q8IZD6 547 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 SLC25A45Q8N413 288 aa12.06□□□□□ -0.48
LINC00339-213ENST00000642137 LILRA3Q8N6C8 439 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-213ENST00000642137 ZNF548Q8NEK5 533 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms