RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 GULP1Q9UBP9 304 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 RAB23Q9ULC3 237 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 RUVBL2Q9Y230 463 aaKnown RBP17.15■□□□□ 0.34
PHGDH-230ENST00000641927 SPAG17Q6Q759 2223 aa17.15■□□□□ 0.34
PHGDH-230ENST00000641927 VPS13AQ96RL7 3174 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 LIN7AO14910 233 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-230ENST00000641927 CFIP05156 583 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 LTA4HP09960 611 aaKnown RBP17.14■□□□□ 0.33
PHGDH-230ENST00000641927 CTSEP14091 401 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 JUNDP17535 347 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 GLRBP48167 497 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 BLKP51451 505 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 FAM83EQ2M2I3 478 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 AGAP9Q5VTM2 703 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 FAM83HQ6ZRV2 1179 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-230ENST00000641927 PIWIL4Q7Z3Z4 852 aaKnown RBP17.14■□□□□ 0.33
PHGDH-230ENST00000641927 VRK3Q8IV63 474 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 PHACTR4Q8IZ21 702 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 CENPLQ8N0S6 344 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-230ENST00000641927 MYO1HQ8N1T3 1032 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 BANPQ8N9N5 519 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 NXNL1Q96CM4 212 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 UBXN10Q96LJ8 280 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 CAAP1Q9H8G2 361 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 ZNF358Q9NW07 568 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-230ENST00000641927 DCDC2Q9UHG0 476 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 KLF15Q9UIH9 416 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 DGKBQ9Y6T7 804 aa17.14■□□□□ 0.33
PHGDH-230ENST00000641927 KLHL33A6NCF5 533 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 H3BM21 787 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 GLRA3O75311 464 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 KLHL2O95198 593 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 WISP3O95389 354 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 CBSLP0DN79 551 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 COL6A2P12110 1019 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 CBSP35520 551 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 SLC26A3P40879 764 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 DLG1Q12959 904 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 PRAMEF14Q5SWL7 426 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 KLC3Q6P597 504 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 SCYL1Q96KG9 808 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 TCEAL2Q9H3H9 227 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 APOBEC3BQ9UH17 382 aaKnown RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 TNRC6BQ9UPQ9 1833 aaKnown RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 SLC5A10A0PJK1 596 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 GPC4O75487 556 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 SLCO2B1O94956 709 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 ENO3P13929 434 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 AK4P27144 223 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 PDHA2P29803 388 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 DPP6P42658 865 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 CTBSQ01459 385 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 ILF3Q12906 894 aaKnown RBP eCLIP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 LRP8Q14114 963 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 TSNAXIP1Q2TAA8 658 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 KIF19Q2TAC6 998 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 SLC30A9Q6PML9 568 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 CLEC14AQ86T13 490 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 CCL4L1Q8NHW4 92 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 GLMNQ92990 594 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 NMRAL1Q9HBL8 299 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 IGSF5Q9NSI5 407 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 TRNAU1APQ9NX07 287 aaKnown RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 GRID1Q9ULK0 1009 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 PSMD13Q9UNM6 376 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 SMG5Q9UPR3 1016 aaKnown RBP17.13■□□□□ 0.33
PHGDH-230ENST00000641927 CDYLQ9Y232 598 aa17.13■□□□□ 0.33
PHGDH-230ENST00000641927 ZNF318Q5VUA4 2279 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 BTN3A1O00481 513 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 SNX2O60749 519 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 KCNJ13O60928 360 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 SLC34A2O95436 690 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 TSPAN12O95859 305 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 CSF2P04141 144 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 GSTA1P08263 222 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 CD1DP15813 335 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 RPL10P27635 214 aaKnown RBP17.12■□□□□ 0.33
PHGDH-230ENST00000641927 CRHR1P34998 444 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 ACTR1BP42025 376 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 KPNA2P52292 529 aaKnown RBP17.12■□□□□ 0.33
PHGDH-230ENST00000641927 ACTR1AP61163 376 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 PLOD1Q02809 727 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-230ENST00000641927 ZNF658BQ4V348 819 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-230ENST00000641927 PRRT3Q5FWE3 981 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 N4BP2L1Q5TBK1 243 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-230ENST00000641927 METRNLQ641Q3 311 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 C16orf46Q6P387 395 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 CFAP61Q8NHU2 1237 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 TCP10LQ8TDR4 215 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 DERL2Q9GZP9 239 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 C12orf65Q9H3J6 166 aaKnown RBP17.12■□□□□ 0.33
PHGDH-230ENST00000641927 TMEM216Q9P0N5 145 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 SNX11Q9Y5W9 270 aa17.12■□□□□ 0.33
PHGDH-230ENST00000641927 TMEM120BA0PK00 339 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 NPEPPSL1A6NEC2 478 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 PDZK1P1A8MUH7 402 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms