RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 GPIP06744 558 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 EMP3P54852 163 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 SREBF2Q12772 1141 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 LRRC73Q5JTD7 316 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 TXNDC11Q6PKC3 985 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 RFLNAQ6ZTI6 216 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 ANKS3Q6ZW76 656 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 HID1Q8IV36 788 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 FBXO30Q8TB52 745 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 FIG4Q92562 907 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 ISOC1Q96CN7 298 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 AURKBQ96GD4 344 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-223ENST00000641597 MUS81Q96NY9 551 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 THEGQ9P2T0 379 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 PKP3Q9Y446 797 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 SLC30A1Q9Y6M5 507 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 UPK1AO00322 258 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 AOC2O75106 756 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 SLC25A14O95258 325 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-223ENST00000641597 ATE1O95260 518 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 LDLRP01130 860 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 PTGER3P43115 390 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 FOXM1Q08050 763 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 COQ5Q5HYK3 327 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 TMTC4Q5T4D3 741 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 ARMC12Q5T9G4 340 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 GPR107Q5VW38 600 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 TSPAN33Q86UF1 283 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 PHACTR4Q8IZ21 702 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 C12orf43Q96C57 262 aaKnown RBP16.55■□□□□ 0.24
PHGDH-223ENST00000641597 EGFL8Q99944 293 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 CLSTN3Q9BQT9 956 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 NPLQ9BXD5 320 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-223ENST00000641597 LRRC3Q9BY71 257 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 SEZ6LQ9BYH1 1024 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 RIC8BQ9NVN3 520 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 DHRS7Q9Y394 339 aa16.55■□□□□ 0.24
PHGDH-223ENST00000641597 C1orf232A0A0U1RR37 186 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 PRMT5O14744 637 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-223ENST00000641597 ESR1P03372 595 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 SELPP16109 830 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 CD247P20963 164 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 SHMT2P34897 504 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 SMAD3P84022 425 aaKnown RBP16.54■□□□□ 0.24
PHGDH-223ENST00000641597 FAM174BQ3ZCQ3 159 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 TMEM259Q4ZIN3 620 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 GPR141Q7Z602 305 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 MILR1Q7Z6M3 343 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 ZSWIM9Q86XI8 627 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 DHRSXQ8N5I4 330 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 OR10A6Q8NH74 314 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 HM13Q8TCT9 377 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 SEPT8Q92599 483 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 CGREF1Q99674 301 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 ASB8Q9H765 288 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 POLR1BQ9H9Y6 1135 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 KANSL1LA0AUZ9 987 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 BMP10O95393 424 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 ENO2P09104 434 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-223ENST00000641597 RANBP1P43487 201 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 CCL23P55773 120 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 TXNDC8Q6A555 127 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 TMEM26Q6ZUK4 368 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 TMBIM1Q969X1 311 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 HSPBAP1Q96EW2 488 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 NSMCE2Q96MF7 247 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 SMURF2Q9HAU4 748 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 IL26Q9NPH9 171 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 ZIM2Q9NZV7 527 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 KLQ9UEF7 1012 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 CCL27Q9Y4X3 112 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 DOCK6Q96HP0 2047 aa16.54■□□□□ 0.24
PHGDH-223ENST00000641597 FZD6O60353 706 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 NOBOXO60393 691 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 TM4SF4P48230 202 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 EEFSECP57772 596 aaKnown RBP16.53■□□□□ 0.24
PHGDH-223ENST00000641597 PIGFQ07326 219 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 SPANXN4Q5MJ08 99 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 PIH1D2Q8WWB5 315 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 ZNF583Q96ND8 569 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 KLF16Q9BXK1 252 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-223ENST00000641597 MYOFQ9NZM1 2061 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 NRG2O14511 850 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-223ENST00000641597 GSNP06396 782 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 MBL2P11226 248 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-223ENST00000641597 PSMA3P25788 255 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 HMOX2P30519 316 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 HMGCLP35914 325 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 CAPGP40121 348 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 ENTPD1P49961 510 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 CLCN4P51793 760 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 CACNG1Q06432 222 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 ADRM1Q16186 407 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 TAF12Q16514 161 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 LHX8Q68G74 356 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 SUSD1Q6UWL2 747 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 DEFB128Q7Z7B8 93 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 TMEM150AQ86TG1 271 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 STK32CQ86UX6 486 aa16.53■□□□□ 0.24
PHGDH-223ENST00000641597 MSRB3Q8IXL7 192 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms