RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 DRC3Q9H069 523 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 VCX3BQ9H321 246 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NDE1Q9NXR1 346 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 UTP6Q9NYH9 597 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NFKBIL1Q9UBC1 381 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 IKZF3Q9UKT9 509 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 TMPRSS11EQ9UL52 423 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 PRPF19Q9UMS4 504 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 FIS1Q9Y3D6 152 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 RAP2CQ9Y3L5 183 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 FADS3Q9Y5Q0 445 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 TRIOBPQ9H2D6 2365 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 PCM1Q15154 2024 aa8.71□□□□□ -1.01
PHGDH-219ENST00000641513 PABPN1LA6NDY0 278 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 OR2AG2A6NM03 316 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 PRR5-ARHGAP8B1AHC4 643 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 TSPAN6O43657 245 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 AP2A2O94973 939 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 FTH1P02794 183 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 PCCBP05166 539 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 ENO1P06733 434 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 IMPDH1P20839 514 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 ARRB2P32121 409 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 AP2B1P63010 937 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 IRX1P78414 480 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 MRPS21P82921 87 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 ARHGAP8P85298 464 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 B4GALNT1Q00973 533 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 GALNT1Q10472 559 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 PRKAA1Q13131 559 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 ENPP2Q13822 863 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 RCN1Q15293 331 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 SYTL3Q4VX76 610 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 TMEM196Q5HYL7 178 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 PIP5KL1Q5T9C9 394 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 PGM2L1Q6PCE3 622 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 KIAA1324Q6UXG2 1013 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 RPS27LQ71UM5 84 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 CYP2U1Q7Z449 544 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 PHYKPLQ8IUZ5 450 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 AFAP1L2Q8N4X5 818 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 AADATQ8N5Z0 425 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 CPSF7Q8N684 471 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 IL17RCQ8NAC3 791 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 DDHD1Q8NEL9 900 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 FAM3CQ92520 227 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 ELMO1Q92556 727 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 MIEF2Q96C03 454 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 PRR11Q96HE9 360 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 FAR2Q96K12 515 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 VPS35Q96QK1 796 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 NR1H4Q96RI1 486 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 ATOH8Q96SQ7 321 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 CDX2Q99626 313 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 RTKNQ9BST9 563 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 FAM126AQ9BYI3 521 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 ZCCHC2Q9C0B9 1178 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 SLC6A17Q9H1V8 727 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 EML4Q9HC35 981 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 TRPV5Q9NQA5 729 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 LATS2Q9NRM7 1088 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 SMOXQ9NWM0 555 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 NMRK1Q9NWW6 199 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 FBXL12Q9NXK8 326 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 TMCO1Q9UM00 188 aa8.71□□□□□ -1.02
PHGDH-219ENST00000641513 NDRG2Q9UN36 371 aaKnown RBP8.71□□□□□ -1.02
PHGDH-219ENST00000641513 CEP192Q8TEP8 1941 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 IGLV3-16A0A075B6K0 115 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 IGLON5A6NGN9 336 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 A6NHS1 94 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 MATN2O00339 956 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 QSOX1O00391 747 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 KPNA5O15131 536 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 RAD51BO15315 384 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 HDAC3O15379 428 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 MAP3K7O43318 606 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 SMNDC1O75940 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 SIX3O95343 332 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 TSPAN12O95859 305 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ACADMP11310 421 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 TSPAN8P19075 237 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 COL9A1P20849 921 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 AOAHP28039 575 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 EEF1DP29692 281 aaKnown RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 DRD3P35462 400 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ARL1P40616 181 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 RPL14P50914 215 aaKnown RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ALDH18A1P54886 795 aaKnown RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 HERVK_113P63132 956 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 HSPA14Q0VDF9 509 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 TMEM115Q12893 351 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 TDGQ13569 410 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 NAA25Q14CX7 972 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 RBBP7Q16576 425 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 MUM1Q2TAK8 710 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 UNC50Q53HI1 259 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 FBXO48Q5FWF7 155 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 HABP4Q5JVS0 413 aaKnown RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 EOGTQ5NDL2 527 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ZNF678Q5SXM1 525 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms