RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RIPK1Q13546 671 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 HTR4Q13639 388 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 RBBP7Q16576 425 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 NEK10Q6ZWH5 1172 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 NLRP8Q86W28 1048 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 PELI3Q8N2H9 469 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 RBM15BQ8NDT2 890 aaKnown RBP16.15■□□□□ 0.18
PHGDH-216ENST00000641375 ZNF382Q96SR6 550 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 EGFL8Q99944 293 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 ZNF385DQ9H6B1 395 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 ZDHHC4Q9NPG8 344 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 PFDN4Q9NQP4 134 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 MTCH2Q9Y6C9 303 aa16.15■□□□□ 0.18
PHGDH-216ENST00000641375 ANHXE9PGG2 379 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 GUCA1CO95843 209 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 CHEK2O96017 543 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 THRAP10827 490 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 PKNOX1P55347 436 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 TMEM115Q12893 351 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 BOP1Q14137 746 aaKnown RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 COL19A1Q14993 1142 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 PHKG1Q16816 387 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 AP1ARQ63HQ0 302 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 CHSY3Q70JA7 882 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 CXorf40AQ8TE69 158 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 TWIST2Q8WVJ9 160 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 CATSPER2Q96P56 530 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 NUSAP1Q9BXS6 441 aaKnown RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 TRIM54Q9BYV2 358 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 ZCCHC2Q9C0B9 1178 aaKnown RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 FBRSL1Q9HCM7 1045 aaKnown RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 MBD1Q9UIS9 605 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 ATG13O75143 517 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 GPC4O75487 556 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 UROSP10746 265 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 COX4I1P13073 169 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 SP140Q13342 867 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 CAMK2GQ13555 558 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 KHDC1Q4VXA5 237 aaKnown RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 TMEM198Q66K66 360 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 LARP4Q71RC2 724 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■□□□□ 11.3
PHGDH-216ENST00000641375 ELMO1Q92556 727 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 ESAMQ96AP7 390 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 LENG8Q96PV6 779 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 RSPH9Q9H1X1 276 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-216ENST00000641375 EPHX3Q9H6B9 360 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 COQ6Q9Y2Z9 468 aa16.14■□□□□ 0.17
PHGDH-216ENST00000641375 PABPN1LA6NDY0 278 aaKnown RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 OR2AG2A6NM03 316 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 PLK4O00444 970 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 UBDO15205 165 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 SLC16A5O15375 505 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 SGTAO43765 313 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 SYNCRIPO60506 623 aaKnown RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 MMP20O60882 483 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 VPS4BO75351 444 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 ADH1BP00325 375 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 ANXA5P08758 320 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 PIK3R1P27986 724 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 SOX9P48436 509 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 RPIAP49247 311 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 PRLHRP49683 370 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 FOXA1P55317 472 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 CNTN1Q12860 1018 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 GTF2H2Q13888 395 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 ZRSR2Q15696 482 aaKnown RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 GTF2H2CQ6P1K8 395 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 TTC23LQ6PF05 361 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 GPRIN3Q6ZVF9 776 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 CHCHD4Q8N4Q1 142 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 POU5F2Q8N7G0 328 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 RP9Q8TA86 221 aaKnown RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 UBTD2Q8WUN7 234 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 SKA2Q8WVK7 121 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 DLG3Q92796 817 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 RHBDF1Q96CC6 855 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 CCT7Q99832 543 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 SLC12A9Q9BXP2 914 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 ETAA1Q9NY74 926 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 WWOXQ9NZC7 414 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 FADS3Q9Y5Q0 445 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 COPG1Q9Y678 874 aaKnown RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 HIST1H2AGP0C0S8 130 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 HIST1H2ADP20671 130 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 GPR1P46091 355 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 CDKL1Q00532 357 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 CST6Q15828 149 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 PIP5KL1Q5T9C9 394 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 UBE2R2Q712K3 238 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 SYVN1Q86TM6 617 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 HOMEZQ8IX15 550 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 RASGEF1AQ8N9B8 481 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 ASB11Q8WXH4 323 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 RSRC1Q96IZ7 334 aaKnown RBP16.13■□□□□ 0.17
PHGDH-216ENST00000641375 HIST1H2AHQ96KK5 128 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 HIST1H2AJQ99878 128 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 H2AFJQ9BTM1 129 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 CD244Q9BZW8 370 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 PARVBQ9HBI1 364 aa16.13■□□□□ 0.17
PHGDH-216ENST00000641375 G3BP2Q9UN86 482 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms