RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 MAPRE2Q15555 327 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 CDKL4Q5MAI5 379 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 C6orf163Q5TEZ5 329 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 GOLGA7Q7Z5G4 137 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 PHYKPLQ8IUZ5 450 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 ULK2Q8IYT8 1036 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 ELMO1Q92556 727 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 RAB7BQ96AH8 199 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 RHBDF1Q96CC6 855 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 TUBGCP3Q96CW5 907 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 CHFRQ96EP1 664 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 HIST1H2AHQ96KK5 128 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 HIST1H2AJQ99878 128 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 H2AFJQ9BTM1 129 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 CD244Q9BZW8 370 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 WWOXQ9NZC7 414 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 TIMM22Q9Y584 194 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 MUC22E2RYF6 1773 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-208ENST00000641023 KIAA1549LQ6ZVL6 1849 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 OR2AG2A6NM03 316 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 TAPBPO15533 448 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 SPINT1O43278 529 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 LZTS3O60299 673 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-208ENST00000641023 RECQL5O94762 991 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-208ENST00000641023 OTCP00480 354 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 HSPA7P48741 367 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 TMEM115Q12893 351 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-208ENST00000641023 EGFLAMQ63HQ2 1017 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 MTSS1LQ765P7 747 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 CHPFQ8IZ52 775 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 OR52B6Q8NGF0 335 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 ACOX2Q99424 681 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 RPP25Q9BUL9 199 aaKnown RBP16.97■□□□□ 0.31
PHGDH-208ENST00000641023 SLC12A9Q9BXP2 914 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 HDAC8Q9BY41 377 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 TUBB1Q9H4B7 451 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 ZDHHC4Q9NPG8 344 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 CLDND1Q9NY35 253 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 ANGPTL3Q9Y5C1 460 aa16.97■□□□□ 0.31
PHGDH-208ENST00000641023 PLXNA2O75051 1894 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 ANKRD12Q6UB98 2062 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 PSMD12O00232 456 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-208ENST00000641023 AIM2O14862 343 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 CCNT2O60583 730 aaKnown RBP16.96■□□□□ 0.31
PHGDH-208ENST00000641023 TBX10O75333 385 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 CIB2O75838 187 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 OR4F21O95013 312 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 LINC00032P0C843 101 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 C6P13671 934 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 BMP8BP34820 402 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 ATP4BP51164 291 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 STX1BP61266 288 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 C18orf21Q32NC0 220 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-208ENST00000641023 KHDC1Q4VXA5 237 aaKnown RBP16.96■□□□□ 0.31
PHGDH-208ENST00000641023 NEK10Q6ZWH5 1172 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 UBE2R2Q712K3 238 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-208ENST00000641023 ZNF765Q7L2R6 523 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 CHCHD4Q8N4Q1 142 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 KYQ8NBH2 561 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 NUS1Q96E22 293 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 EFCAB1Q9HAE3 211 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 PARVBQ9HBI1 364 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 NDE1Q9NXR1 346 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 ARL15Q9NXU5 204 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 LMCD1Q9NZU5 365 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 OPTCQ9UBM4 332 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 HCN2Q9UL51 889 aa16.96■□□□□ 0.31
PHGDH-208ENST00000641023 XIRP2A4UGR9 3374 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 TCF20Q9UGU0 1960 aaKnown RBP16.95■□□□□ 0.3
PHGDH-208ENST00000641023 ARNTLO00327 626 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 SLC16A5O15375 505 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 SGTAO43765 313 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 ATG13O75143 517 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 ENTPD5O75356 428 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 LBPP18428 481 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 ITGAXP20702 1163 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 PSMD8P48556 350 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 NUDT2P50583 147 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 CDKL1Q00532 357 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 CREB5Q02930 508 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 SP140Q13342 867 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 FASTKQ14296 549 aaKnown RBP16.95■□□□□ 0.3
PHGDH-208ENST00000641023 TMEM52BQ4KMG9 183 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 C16orf89Q6UX73 402 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 HOMEZQ8IX15 550 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 DEFB107AQ8IZN7 70 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 CDYL2Q8N8U2 506 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 UBTD2Q8WUN7 234 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 ASB11Q8WXH4 323 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 ZNF576Q9H609 170 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 BTRCQ9Y297 605 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 COQ6Q9Y2Z9 468 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 STON1Q9Y6Q2 735 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 SZT2Q5T011 3432 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 COL4A3Q01955 1670 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 A0A088AWK7 358 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 PLK4O00444 970 aa16.95■□□□□ 0.3
PHGDH-208ENST00000641023 NPC1O15118 1278 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms