RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SDR39U1Q9NRG7 319 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 VNN3Q9NY84 501 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF221Q9UK13 617 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 STAP1Q9ULZ2 295 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 TTC3P53804 2025 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 FFAR3O14843 346 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 GPR42O15529 346 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ICMTO60725 284 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 OR4F21O95013 312 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 G6PDP11413 515 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 MYCLP1P12525 358 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 EFNA1P20827 205 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 LIPAP38571 399 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 HTR6P50406 440 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 OR2B6P58173 313 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 HERVK_113P63132 956 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 PDZD4Q76G19 769 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CYP4Z1Q86W10 505 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 GALNT12Q8IXK2 581 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 C10orf111Q8N326 155 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ATPAF2Q8N5M1 289 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 C2CD4AQ8NCU7 369 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 MTFMTQ96DP5 389 aaKnown RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 SLC47A1Q96FL8 570 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ERVK-6Q9BXR3 956 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 GPR45Q9Y5Y3 372 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CCL15-CCL14A0A0B4J2E2 113 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 UPK3BL1B0FP48 263 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 UPK3BL2E5RIL1 263 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 H0YAE9 185 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CSF2P04141 144 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ANXA6P08133 673 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CNPP09543 421 aaKnown RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CCR1P32246 355 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CD86P42081 329 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 TGM4P49221 684 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ST13P50502 369 aaKnown RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CLCNKBP51801 687 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 WNT3AP56704 352 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 DNAJB13P59910 316 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CD83Q01151 205 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CBLBQ13191 982 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 FSCN1Q16658 493 aaKnown RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CCL15Q16663 113 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 BCL7AQ4VC05 210 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 RBM48Q5RL73 367 aaKnown RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CES5AQ6NT32 575 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 PHYKPLQ8IUZ5 450 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 ASCC1Q8N9N2 400 aaKnown RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 OR52B6Q8NGF0 335 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 BPIFB1Q8TDL5 484 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 NPY6RQ99463 290 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 SH3GL1Q99961 368 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 BTBD2Q9BX70 525 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 MMP28Q9H239 520 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-227ENST00000640957 TESMINQ9Y4I5 508 aa13.56□□□□□ -0.24
SCARB2-227ENST00000640957 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 PDHXO00330 501 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 CTDSP2O14595 271 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 CPNE3O75131 537 aaKnown RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 VIPP01282 170 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 SLC10A3P09131 477 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 ENDOUP21128 410 aaKnown RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 GADD45AP24522 165 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 HADHAP40939 763 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 PTCHD3Q3KNS1 767 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 ZFP69Q49AA0 526 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 AASDHQ4L235 1098 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF484Q5JVG2 852 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 PARP16Q8N5Y8 322 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 PCNPQ8WW12 178 aaKnown RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■■■ 62.8
SCARB2-227ENST00000640957 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 OPTCQ9UBM4 332 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 GOLGA4Q13439 2230 aaKnown RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 FAM92AA1XBS5 289 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 SOCS7O14512 581 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 RAP2AP10114 183 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 KPNA2P52292 529 aaKnown RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 WDR45BQ5MNZ6 344 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 TPRG1LQ5T0D9 272 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 WSCD1Q658N2 575 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 GPRC5AQ8NFJ5 357 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 OR51E2Q9H255 320 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 KIAA1257Q9ULG3 409 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 RNF112Q9ULX5 631 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 POLR3HQ9Y535 204 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-227ENST00000640957 ARL5AQ9Y689 179 aa13.55□□□□□ -0.24
SCARB2-227ENST00000640957 GPR39O43194 453 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 TSC22D2O75157 780 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 GABARAPO95166 117 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 GRK5P34947 590 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 CSRP3P50461 194 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 PTPRRQ15256 657 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms