RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 LYVE1Q9Y5Y7 322 aa10.88□□□□□ -0.67
SCN1B-208ENST00000640135 COL22A1Q8NFW1 1626 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 A0A1W2PPM1 405 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 DUXAA6NLW8 204 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 OR5K4A6NMS3 321 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 KLK3P07288 261 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 ALPIP09923 528 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 CCNA2P20248 432 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 IDH2P48735 452 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 POLR2JP52435 117 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 ATXN1P54253 815 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 C1QTNF8P60827 252 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 GCNT6Q5T4J0 391 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 C11orf65Q8NCR3 313 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 SMG8Q8ND04 991 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 OR10H5Q8NGA6 315 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 ZHX1-C8orf76Q96EF9 292 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 ART5Q96L15 291 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 C5orf34Q96MH7 638 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 EBF3Q9H4W6 596 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 SAMHD1Q9Y3Z3 626 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 MBLAC1A4D2B0 266 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 CAPN14A8MX76 684 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 TSPAN6O43657 245 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 PLIN3O60664 434 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 WFS1O76024 890 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 SLC9A5Q14940 896 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 PTGES3Q15185 160 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 SLC30A8Q8IWU4 369 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 UBR7Q8N806 425 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 HCAR2Q8TDS4 363 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 CYB5D2Q8WUJ1 264 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 PEX13Q92968 403 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 DPYSL5Q9BPU6 564 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 TAPBPLQ9BX59 468 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 MAT2BQ9NZL9 334 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 DNAJB4Q9UDY4 337 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 LRCH1Q9Y2L9 728 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 COQ6Q9Y2Z9 468 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 UGT2B17O75795 530 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 PAPSS2O95340 614 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 LDOC1O95751 146 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 GSRP00390 522 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 PRG2P13727 222 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 ATP1B2P14415 290 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 SLC26A3P40879 764 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 TAS2R39P59534 338 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 IL23RQ5VWK5 629 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 SLC9A4Q6AI14 798 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 ZC3H3Q8IXZ2 948 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 XAGE5Q8WWM1 108 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 KLK6Q92876 244 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 MYDGFQ969H8 173 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 FANCFQ9NPI8 374 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 C4BP0C0L5 1744 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 LAMTOR5O43504 91 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 IL6P05231 212 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 NUP62P37198 522 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 C10orf62Q5T681 223 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 LRRC70Q7Z2Q7 622 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 LDB1Q86U70 411 aaPredicted RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 EGFL6Q8IUX8 553 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 CNTD1Q8N815 330 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 ACSL5Q9ULC5 683 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 GNEQ9Y223 722 aaKnown RBP10.87□□□□□ -0.67
SCN1B-208ENST00000640135 LZTS1Q9Y250 596 aa10.87□□□□□ -0.67
SCN1B-208ENST00000640135 TCRBV7S2A1N4TA0A589 114 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 DHRS12A0PJE2 317 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 FAM25AB3EWG3 89 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 FAM25CB3EWG5 89 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 FAM25GB3EWG6 89 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 C9IYK1 514 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 RGS20O76081 388 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 AGR2O95994 175 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 RABGGTBP53611 331 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SPIBQ01892 262 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ASTE1Q2TB18 679 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 CRELD2Q6UXH1 353 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 NUDT13Q86X67 352 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 TSGA13Q96PP4 275 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 GPR62Q9BZJ7 368 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 CPED1A4D0V7 1026 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 TEX28O15482 410 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 TLX3O43711 291 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 POP7O75817 140 aaKnown RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 CSTF2P33240 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 RPS21P63220 83 aaKnown RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ELOCQ15369 112 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ANKRD22Q5VYY1 191 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 HFE2Q6ZVN8 426 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ERN2Q76MJ5 926 aaKnown RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 C2orf73Q8N5S3 287 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SIDT2Q8NBJ9 832 aaKnown RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 C19orf18Q8NEA5 215 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 EXOSC8Q96B26 276 aaKnown RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 RCN3Q96D15 328 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 GMPPBQ9Y5P6 360 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 PRORSD1PA6NEY8 169 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms