RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ADALQ6DHV7 355 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 PWWP2BQ6NUJ5 590 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 CORO6Q6QEF8 472 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 IKBIPQ70UQ0 350 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 GPALPP1Q8IXQ4 340 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 TEX11Q8IYF3 940 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 TMTC2Q8N394 836 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 ZNF383Q8NA42 475 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 DAZLQ92904 295 aaKnown RBP4.29□□□□□ -1.72
CCDC7-216ENST00000640058 MUC13Q9H3R2 512 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 MYH16Q9H6N6 1097 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 ATAD3AQ9NVI7 634 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 KLHL8Q9P2G9 620 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-216ENST00000640058 CMAHPQ9Y471 501 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 PCDHGA5Q9Y5G8 931 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 PRSS21Q9Y6M0 314 aa4.29□□□□□ -1.72
CCDC7-216ENST00000640058 A0A0J9YWU9 116 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 MEIOCA2RUB1 952 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 A8MZ25 164 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 TCERG1O14776 1098 aaKnown RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SORBS2O94875 1100 aaKnown RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 EML2O95834 649 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 GH2P01242 217 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 CD4P01730 458 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 CDH2P19022 906 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 WNT5AP41221 380 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 NKX2-1P43699 371 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 RARS2Q5T160 578 aaKnown RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 JADE1Q6IE81 842 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SARM1Q6SZW1 724 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SLC16A9Q7RTY1 509 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SCYL3Q8IZE3 742 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 NGEFQ8N5V2 710 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 PPHLN1Q8NEY8 458 aaKnown RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 KBTBD8Q8NFY9 601 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 TBC1D16Q8TBP0 767 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 MOAP1Q96BY2 351 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 GMPPAQ96IJ6 420 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 POM121L2Q96KW2 1035 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 RTP3Q9BQQ7 232 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SRSF8Q9BRL6 282 aaKnown RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 CDK19Q9BWU1 502 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 ITPAQ9BY32 194 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 PAK5Q9P286 719 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 TMEM181Q9P2C4 612 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SPIN1Q9Y657 262 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SMAD5-AS1Q9Y6J3 95 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SESN1Q9Y6P5 492 aa4.28□□□□□ -1.72
CCDC7-216ENST00000640058 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.28□□□□□ -1.72
CCDC7-216ENST00000640058 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 FRMD3A2A2Y4 597 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 B4E171 279 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 J3KRW8 73 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 CLTBP09497 229 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 DPEP1P16444 411 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 ARL3P36405 182 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 TSPAN7P41732 249 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 BMXP51813 675 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 SNRPEP62304 92 aaKnown RBP4.27□□□□□ -1.73
CCDC7-216ENST00000640058 MPP1Q00013 466 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 GCNT6Q5T4J0 391 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 SNX30Q5VWJ9 437 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 ARID3BQ8IVW6 561 aaPredicted RBP4.27□□□□□ -1.73
CCDC7-216ENST00000640058 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 GIMAP5Q96F15 307 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 TRIM15Q9C019 465 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 FTOQ9C0B1 505 aaKnown RBP eCLIP4.27□□□□□ -1.73
CCDC7-216ENST00000640058 KRT84Q9NSB2 600 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 OLA1Q9NTK5 396 aaKnown RBP4.27□□□□□ -1.73
CCDC7-216ENST00000640058 ZDHHC18Q9NUE0 388 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 PLCXD1Q9NUJ7 323 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 BARHL2Q9NY43 387 aa4.27□□□□□ -1.73
CCDC7-216ENST00000640058 IGLV9-49A0A0B4J1Y8 123 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 PRSS51A0A1B0GVH4 220 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 A0A1B0GVY2 172 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 MYO1GB0I1T2 1018 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 DDX58O95786 925 aaKnown RBP4.26□□□□□ -1.73
CCDC7-216ENST00000640058 GABRB1P18505 474 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 CHMP24386 653 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 SLC6A12P48065 614 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 PRAMEP78395 509 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 P2RY6Q15077 328 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 DLG2Q15700 870 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 GAGE2EQ4V326 116 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 TMEM154Q6P9G4 183 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 Q6ZSR9 355 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 GALNT5Q7Z7M9 940 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 TICAM1Q8IUC6 712 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 SCML4Q8N228 414 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 SPEM1Q8N4L4 309 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 TMEM178AQ8NBL3 297 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 NSL1Q96IY1 281 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 MYADMQ96S97 322 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 IWS1Q96ST2 819 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 VGLL1Q99990 258 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 ABHD6Q9BV23 337 aa4.26□□□□□ -1.73
CCDC7-216ENST00000640058 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms