RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 LINC00614P0C842 121 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 CAPGP40121 348 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 EPHA5P54756 1037 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 PSPHP78330 225 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 POU4F3Q15319 338 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 PRSS42Q7Z5A4 293 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SCN4BQ8IWT1 228 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 GHDCQ8N2G8 530 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 CPEB3Q8NE35 698 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 BHLHE22Q8NFJ8 381 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 C7orf43Q8WVR3 580 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 APOLD1Q96LR9 279 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ZCCHC3Q9NUD5 404 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 NUBP2Q9Y5Y2 271 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 POTEMA6NI47 508 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 RFPL4AA6NLU0 287 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 RFPL4AL1F8VTS6 287 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ITGB1BP1O14713 200 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 FLRT2O43155 660 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ITM2AO43736 263 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SSX4O60224 188 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 FKBP6O75344 327 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SERPING1P05155 500 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 GALTP07902 379 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 GRK4P32298 578 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 NR4A2P43354 598 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 MAGOHP61326 146 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 TEKQ02763 1124 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 KCNH2Q12809 1159 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SYT16Q17RD7 645 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 CCNYL2Q5T2Q4 361 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 TTI2Q6NXR4 508 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 POTEGQ6S5H5 508 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SLC22A25Q6T423 547 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SUSD1Q6UWL2 747 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ADGRG6Q86SQ4 1221 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 PPM1KQ8N3J5 372 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ZMIZ2Q8NF64 920 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 RHPN1Q8TCX5 695 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 MAGOHBQ96A72 148 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SLC9A7Q96T83 725 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 DBNDD2Q9BQY9 259 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 OCSTAMPQ9BR26 566 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 C11orf70Q9BRQ4 267 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 RTKNQ9BST9 563 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 TWSG1Q9GZX9 223 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 NGBQ9NPG2 151 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 KLHL28Q9NXS3 571 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 STRAPQ9Y3F4 350 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 PCDHGA6Q9Y5G7 932 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 UBE4BO95155 1302 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 A0A1B0GV72 72 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RBAK-RBAKDNI3L0D1 243 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PAPSS1O43252 624 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 HTRA2O43464 458 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RFPL2O75678 378 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PTBP3O95758 552 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PTTG1O95997 202 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 BRAFP15056 766 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 IMPDH1P20839 514 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 DLG1Q12959 904 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 DMP1Q13316 513 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PAN3Q58A45 887 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 XKR4Q5GH76 650 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 BRAT1Q6PJG6 821 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RAB44Q7Z6P3 723 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CELF2-AS1Q8N7Q2 184 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MFSD9Q8NBP5 474 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 C1orf216Q8TAB5 229 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RRNAD1Q96FB5 475 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ZFP42Q96MM3 310 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PYM1Q9BRP8 204 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ASB8Q9H765 288 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 EFCAB1Q9HAE3 211 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RNF14Q9UBS8 474 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RIPK3Q9Y572 518 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 A0A087WXM4 84 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 A8MUI8 341 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SMAD7O15105 426 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 JAK2O60674 1132 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 IFNA10P01566 189 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 AMHP03971 560 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ADRB2P07550 413 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TSHRP16473 764 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 IGFBP5P24593 272 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 LAP3P28838 519 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 OXTRP30559 389 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CDKN1BP46527 198 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RAC3P60763 192 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SNAP25P60880 206 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NPRL3Q12980 569 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MAMLD1Q13495 774 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RRAGBQ5VZM2 374 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MTFR2Q6P444 385 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NT5DC3Q86UY8 548 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MCOLN2Q8IZK6 566 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 OR1M1Q8NGA1 313 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RAET1EQ8TD07 263 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms