RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 STBD1O95210 358 aa16.42■□□□□ 0.22
SCARB2-210ENST00000638567 RPN2P04844 631 aa16.42■□□□□ 0.22
SCARB2-210ENST00000638567 UGT1A1P22309 533 aa16.42■□□□□ 0.22
SCARB2-210ENST00000638567 UGT1A4P22310 534 aa16.42■□□□□ 0.22
SCARB2-210ENST00000638567 UGT1A3P35503 534 aa16.42■□□□□ 0.22
SCARB2-210ENST00000638567 UGT1A5P35504 534 aa16.42■□□□□ 0.22
SCARB2-210ENST00000638567 FNDC3BQ53EP0 1204 aaKnown RBP16.42■□□□□ 0.22
SCARB2-210ENST00000638567 TTC29Q8NA56 475 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-210ENST00000638567 C16orf70Q9BSU1 422 aa16.42■□□□□ 0.22
SCARB2-210ENST00000638567 KIAA1522Q9P206 1035 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-210ENST00000638567 A0A1W2PPW3 197 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 OR2AG2A6NM03 316 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ANXA4P09525 319 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-210ENST00000638567 CDH1P12830 882 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 FKBP1BP68106 108 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ZNF33AQ06730 810 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ARMC6Q6NXE6 501 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ASF1AQ9Y294 204 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 J3QRK9 145 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 TNFRSF11BO00300 401 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 SYN3O14994 580 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ERAL1O75616 437 aaKnown RBP16.41■□□□□ 0.22
SCARB2-210ENST00000638567 FAM163BP0C2L3 166 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 IQCF3P0C7M6 154 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ZNF12P17014 697 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 PROZP22891 400 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 RD3Q7Z3Z2 195 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 C14orf80Q86SX3 495 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 CSGALNACT1Q8TDX6 532 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 COL26A1Q96A83 441 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 FBXL8Q96CD0 374 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 CHCHD6Q9BRQ6 235 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 GPATCH1Q9BRR8 931 aaKnown RBP16.41■□□□□ 0.22
SCARB2-210ENST00000638567 RBMX2Q9Y388 322 aaKnown RBP16.41■□□□□ 0.22
SCARB2-210ENST00000638567 CACNA1SQ13698 1873 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 PRPS2P11908 318 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 UGT2B15P54855 530 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 TRIM32Q13049 653 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 TNFAIP8L3Q5GJ75 292 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ZNF678Q5SXM1 525 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 SPRYD7Q5W111 196 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 TCAIMQ8N3R3 496 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 FAR1Q8WVX9 515 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 C12orf43Q96C57 262 aaKnown RBP16.41■□□□□ 0.22
SCARB2-210ENST00000638567 ITGB1BP2Q9UKP3 347 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 TESMINQ9Y4I5 508 aa16.41■□□□□ 0.22
SCARB2-210ENST00000638567 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 LOC110117498-PIK3R3F6TDL0 507 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 TNFRSF21O75509 655 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 F2P00734 622 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 OLR1P78380 273 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 ELP6Q0PNE2 266 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 C11orf65Q8NCR3 313 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 PIH1D2Q8WWB5 315 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 PYCR2Q96C36 320 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 ASAH2Q9NR71 780 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 GKN1Q9NS71 199 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 MYH4Q9Y623 1939 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 ONECUT3O60422 494 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-210ENST00000638567 NTSP30990 170 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 KCNQ1P51787 676 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 DNAJB13P59910 316 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 VN1R5Q7Z5H4 357 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 MARVELD2Q8N4S9 558 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 NPWQ8N729 165 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 ST13P5Q8NFI4 369 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-210ENST00000638567 RPL10LQ96L21 214 aaKnown RBP16.4■□□□□ 0.22
SCARB2-210ENST00000638567 TCF25Q9BQ70 676 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 SPRTNQ9H040 489 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-210ENST00000638567 CD84Q9UIB8 345 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 CENPXA8MT69 81 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 K7EPI3 171 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 AIREO43918 545 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 AP1S1P61966 158 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 CBX3Q13185 183 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 CDC73Q6P1J9 531 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 GATAD2AQ86YP4 633 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 BIRC7Q96CA5 298 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 CCSER2Q9H7U1 834 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 TMEM39AQ9NV64 488 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 EURLQ9NYK6 297 aa16.4■□□□□ 0.22
SCARB2-210ENST00000638567 PSMD11O00231 422 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 IDH3BO43837 385 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 ALDH1A2O94788 518 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 GPR153Q6NV75 609 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 PRSS55Q6UWB4 352 aaPredicted RBP16.39■□□□□ 0.22
SCARB2-210ENST00000638567 GPRIN1Q7Z2K8 1008 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 RAVER1Q8IY67 606 aaKnown RBP16.39■□□□□ 0.22
SCARB2-210ENST00000638567 CAMKK1Q8N5S9 505 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 EEF1AKMT1Q8WVE0 214 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 ZIM2Q9NZV7 527 aa16.39■□□□□ 0.22
SCARB2-210ENST00000638567 PDE9AO76083 593 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 FMO3P31513 532 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 SFSWAPQ12872 951 aaKnown RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 COX10Q12887 443 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 TECRLQ5HYJ1 363 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 CHST15Q7LFX5 561 aaPredicted RBP16.39■□□□□ 0.21
SCARB2-210ENST00000638567 CLDN19Q8N6F1 224 aa16.39■□□□□ 0.21
SCARB2-210ENST00000638567 OR5K1Q8NHB7 308 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms