RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PCDHGA4Q9Y5G9 962 aa16.38■□□□□ 0.21
CACNA1A-259ENST00000638114 ATMQ13315 3056 aa16.38■□□□□ 0.21
CACNA1A-259ENST00000638114 IGLV3-16A0A075B6K0 115 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 MROH6A6NGR9 719 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 SUN1O94901 812 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 FGGP02679 453 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 APRTP07741 180 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 SEMA5AQ13591 1074 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 KRT33BQ14525 404 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 SIX1Q15475 284 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 CCNG2Q16589 344 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 DBN1Q16643 649 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 XKR5Q6UX68 686 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 PRSS42Q7Z5A4 293 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 PIANPQ8IYJ0 282 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 GLIS1Q8NBF1 620 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 MAIP1Q8WWC4 291 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 CCM2Q9BSQ5 444 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 TLR10Q9BXR5 811 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 RAB33BQ9H082 229 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 VPS37BQ9H9H4 285 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 SMARCAL1Q9NZC9 954 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 EPHA6Q9UF33 1036 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 PPP2R2CQ9Y2T4 447 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 KALRNO60229 2985 aa16.37■□□□□ 0.21
CACNA1A-259ENST00000638114 C17orf113A0A1B0GUU1 675 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 HEATR9A2RTY3 570 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 OR51F1A6NGY5 319 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 CEP104O60308 925 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 STK17BO94768 372 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 ZSCAN5DPP0CG00 497 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 WT1P19544 449 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 GRIA1P42261 906 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 PPP1CAP62136 330 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 SH3BP2P78314 561 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 LAMB3Q13751 1172 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 CLDN19Q8N6F1 224 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 WBP1Q96G27 269 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 COG4Q9H9E3 785 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 SLC24A2Q9UI40 661 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 PILRAQ9UKJ1 303 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 HEBP2Q9Y5Z4 205 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 COLEC10Q9Y6Z7 277 aa16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 FASNP49327 2511 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-259ENST00000638114 CCDC162PA2VCL2 907 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 LIFP15018 202 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 PSMA3P25788 255 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 CXCR5P32302 372 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 RPL22P35268 128 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 LY6DQ14210 128 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 TSTD2Q5T7W7 516 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 CAPRIN2Q6IMN6 1127 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 ZNF449Q6P9G9 518 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 DRICH1Q6PGQ1 229 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 GSTA5Q7RTV2 222 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 OOSP2Q86WS3 158 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 NLGN4XQ8N0W4 816 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 NLGN4YQ8NFZ3 816 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 ZFPM2Q8WW38 1151 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 KLHL6Q8WZ60 621 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 OR6C1Q96RD1 312 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 KIR3DX1Q9H7L2 352 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 CASS4Q9NQ75 786 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 SLC2A6Q9UGQ3 507 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 ZKSCAN5Q9Y2L8 839 aa16.35■□□□□ 0.21
CACNA1A-259ENST00000638114 PIKFYVEQ9Y2I7 2098 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 OR6C74A6NCV1 312 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 OR5K3A6NET4 321 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 IFRD1O00458 451 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 C1QL1O75973 258 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 ADRA1DP25100 572 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 NDUFS1P28331 727 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 FOXN2P32314 431 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 NSG1P42857 185 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 C19orf57Q0VDD7 668 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 ITIH4Q14624 930 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 DNTTIP2Q5QJE6 756 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 ARMC6Q6NXE6 501 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 AFTPHQ6ULP2 937 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 TIPARPQ7Z3E1 657 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 OR13J1Q8NGT2 312 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 UBXN4Q92575 508 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 HDAC10Q969S8 669 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 RNF31Q96EP0 1072 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 ELMO2Q96JJ3 720 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 FERD3LQ96RJ6 166 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 RANBP9Q96S59 729 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 MAP3K3Q99759 626 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 ULBP3Q9BZM4 244 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 SPRY4Q9C004 299 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 HRASLS2Q9NWW9 162 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 DRG1Q9Y295 367 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 TMEM184BQ9Y519 407 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 PIEZO2Q9H5I5 2752 aa16.34■□□□□ 0.21
CACNA1A-259ENST00000638114 IGHV5-51A0A0C4DH38 117 aa16.33■□□□□ 0.2
CACNA1A-259ENST00000638114 AP2A2O94973 939 aa16.33■□□□□ 0.2
CACNA1A-259ENST00000638114 GOT2P00505 430 aaKnown RBP16.33■□□□□ 0.2
CACNA1A-259ENST00000638114 GSTM1P09488 218 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms