RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 PSMD9O00233 223 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ADAMTS3O15072 1205 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 INSIG1O15503 277 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 GJB6O95452 261 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MT-CO1P00395 513 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 IGHEP01854 428 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TACSTD2P09758 323 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FAM86B2P0C5J1 330 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ARF4P18085 180 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NFKB2Q00653 900 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SP140Q13342 867 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SEMA3AQ14563 771 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PLGLAQ15195 96 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 GCNT6Q5T4J0 391 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CES3Q6UWW8 571 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ABRAXAS1Q6UWZ7 409 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 DEFB107AQ8IZN7 70 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 DENND6BQ8NEG7 585 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 DNAJA4Q8WW22 397 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PMM1Q92871 262 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CDCA3Q99618 268 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 THUMPD1Q9NXG2 353 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 OGDHLQ9ULD0 1010 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MRPS7Q9Y2R9 242 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MRASO14807 208 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FKBP6O75344 327 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 IPO13O94829 963 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MAXP61244 160 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MC1RQ01726 317 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ARSIQ5FYB1 569 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 RAB43Q86YS6 212 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 C8orf59Q8N0T1 100 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 OR5M3Q8NGP4 307 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ACTRT1Q8TDG2 376 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 POF1BQ8WVV4 589 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MKL1Q969V6 931 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CERS2Q96G23 380 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ZBTB45Q96K62 511 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NAA11Q9BSU3 229 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MKKSQ9NPJ1 570 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 KIF13AQ9H1H9 1805 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 hCG_2014768A0A024R1R8 64 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PTGES3LE9PB15 166 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PSMD11O00231 422 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NPC1O15118 1278 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NR2F6P10588 404 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ENDOUP21128 410 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ITPKAP23677 461 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SLC1A2P43004 574 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF84P51523 738 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NDST2P52849 883 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 HNRNPKP61978 463 aaKnown RBP eCLIP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ARG2P78540 354 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 GNA12Q03113 381 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF311Q5JNZ3 666 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PLEKHA7Q6IQ23 1121 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TATDN1Q6P1N9 297 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 KDM7AQ6ZMT4 941 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ALDH16A1Q8IZ83 802 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PTGR2Q8N8N7 351 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 POC5Q8NA72 575 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 XAGE5Q8WWM1 108 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 KXD1Q9BQD3 176 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 HIPK2Q9H2X6 1198 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FN3KQ9H479 309 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 RMI1Q9H9A7 625 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 EVLQ9UI08 416 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PLCL2Q9UPR0 1127 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 BCL9O00512 1426 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 LOC100506127A0A0U1RQW1 187 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CCDC182A6NF36 153 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 E7ENQ6 273 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FOXN1O15353 648 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NDUFS4O43181 175 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PSIP1O75475 530 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 LRIG2O94898 1065 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ALOX5P09917 674 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 RHOQP17081 205 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SEPHS1P49903 392 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CRISP1P54107 249 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 UBE2NP61088 152 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 DPYSQ14117 519 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PYDC2Q56P42 97 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 RAB11FIP2Q7L804 512 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ZER1Q7Z7L7 766 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PLXDC1Q8IUK5 500 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ARHGAP12Q8IWW6 846 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 RGMAQ96B86 450 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SCGB3A2Q96PL1 93 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 LGR4Q9BXB1 951 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 YIPF3Q9GZM5 350 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TRPV4Q9HBA0 871 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SLAMF7Q9NQ25 335 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ASB6Q9NWX5 421 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NDUFA13Q9P0J0 144 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CD207Q9UJ71 328 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NAALADL1Q9UQQ1 740 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 LRCH1Q9Y2L9 728 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TSC22D4Q9Y3Q8 395 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FAM205CA6NFA0 338 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms