RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ZNF148Q9UQR1 794 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 HEMK1Q9Y5R4 338 aaPredicted RBP18.53■□□□□ 0.56
CLN6-221ENST00000637494 C17orf113A0A1B0GUU1 675 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 B8ZZF3 427 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 H7C0S8 307 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 IFRD1O00458 451 aaPredicted RBP18.52■□□□□ 0.56
CLN6-221ENST00000637494 ARHGAP6O43182 974 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 KIF1CO43896 1103 aaKnown RBP18.52■□□□□ 0.56
CLN6-221ENST00000637494 WT1P19544 449 aaPredicted RBP18.52■□□□□ 0.56
CLN6-221ENST00000637494 ACRV1P26436 265 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 FDFT1P37268 417 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 GDF10P55107 478 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 CYP4F2P78329 520 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 CACNG1Q06432 222 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 PRKAA1Q13131 559 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 TBR1Q16650 682 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 SKIDA1Q1XH10 827 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 LINC00303Q3SY05 128 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 C6orf15Q6UXA7 325 aaPredicted RBP18.52■□□□□ 0.56
CLN6-221ENST00000637494 PPP1R21Q6ZMI0 780 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 PPP1R3BQ86XI6 285 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 KMT5CQ86Y97 462 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 TAB3Q8N5C8 712 aaPredicted RBP18.52■□□□□ 0.56
CLN6-221ENST00000637494 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.52■□□□□ 0.56
CLN6-221ENST00000637494 STAMBPL1Q96FJ0 436 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 SLC45A3Q96JT2 553 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 SLC12A9Q9BXP2 914 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 SPRY4Q9C004 299 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 FAM117AQ9C073 453 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 SEMA4CQ9C0C4 833 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 HRASLS2Q9NWW9 162 aa18.52■□□□□ 0.56
CLN6-221ENST00000637494 TCRBV7S2A1N4TA0A589 114 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 OR5K3A6NET4 321 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 QSOX1O00391 747 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 CCL22O00626 93 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 LIASO43766 372 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 NRDCO43847 1150 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 IFNB1P01574 187 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 MT-ND3P03897 115 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 GSTM1P09488 218 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 CCNYL3P0C7X3 344 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 NELFEP18615 380 aaKnown RBP18.51■□□□□ 0.55
CLN6-221ENST00000637494 SH3BP2P78314 561 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 GSTM4Q03013 218 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 ACY1Q03154 408 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 CDH17Q12864 832 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 RPS6KA1Q15418 735 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 BORAQ6PGQ7 559 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 SERPINA9Q86WD7 417 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 ATG4AQ8WYN0 398 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 CDKN2AIPNLQ96HQ2 116 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 ELMO2Q96JJ3 720 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 TTC1Q99614 292 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 KIR3DX1Q9H7L2 352 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 SLC24A2Q9UI40 661 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 RARRES3Q9UL19 164 aa18.51■□□□□ 0.55
CLN6-221ENST00000637494 AHCTF1Q8WYP5 2266 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 LOC101059948A0A1B0GTJ6 334 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 TLCD2A6NGC4 264 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 F8W8V4 182 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 DLGAP3O95886 979 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 FGF5P12034 268 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 PLA2G2AP14555 144 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.5■□□□□ 0.55
CLN6-221ENST00000637494 TMTC4Q5T4D3 741 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 TIPARPQ7Z3E1 657 aaKnown RBP18.5■□□□□ 0.55
CLN6-221ENST00000637494 BPHLQ86WA6 291 aaPredicted RBP18.5■□□□□ 0.55
CLN6-221ENST00000637494 SLC13A5Q86YT5 568 aaPredicted RBP18.5■□□□□ 0.55
CLN6-221ENST00000637494 CCDC89Q8N998 374 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 EXD3Q8N9H8 876 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 NAT14Q8WUY8 206 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 FERD3LQ96RJ6 166 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 PIH1D1Q9NWS0 290 aaKnown RBP18.5■□□□□ 0.55
CLN6-221ENST00000637494 LNPEPQ9UIQ6 1025 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 PCDHB3Q9Y5E6 796 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 RPS6KL1Q9Y6S9 549 aa18.5■□□□□ 0.55
CLN6-221ENST00000637494 MGAQ8IWI9 3026 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 IGHV5-51A0A0C4DH38 117 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 TRBV5-4A0A0C4DH59 114 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 HEATR9A2RTY3 570 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 OR6C74A6NCV1 312 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 MATN2O00339 956 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 MAP3K7O43318 606 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 KIAA0754O94854 1291 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 AP2A2O94973 939 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 CCDC175P0C221 793 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 FAM87AP0C7U9 286 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 MSNP26038 577 aaKnown RBP18.49■□□□□ 0.55
CLN6-221ENST00000637494 STAT5AP42229 794 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 NSG1P42857 185 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 CCR10P46092 362 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 HSD11B2P80365 405 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 NFATC3Q12968 1075 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 RPA4Q13156 261 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 TUBB3Q13509 450 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 CAPRIN2Q6IMN6 1127 aaKnown RBP18.49■□□□□ 0.55
CLN6-221ENST00000637494 DUS1LQ6P1R4 473 aaKnown RBP18.49■□□□□ 0.55
CLN6-221ENST00000637494 UNC5BQ8IZJ1 945 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 CARFQ8N187 725 aa18.49■□□□□ 0.55
CLN6-221ENST00000637494 ACVR1CQ8NER5 493 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms