RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 AZIN2Q96A70 460 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 TRIM43Q96BQ3 446 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 NDC1Q9BTX1 674 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 ENY2Q9NPA8 101 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 CRNNQ9UBG3 495 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 GNEQ9Y223 722 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 WASHC1A8K0Z3 465 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 WASH3PC4AMC7 463 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 DACT2Q5SW24 774 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 WASH2PQ6VEQ5 465 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 SLC29A4Q7RTT9 530 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 PROKR2Q8NFJ6 384 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 ING4Q9UNL4 249 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 FARSAQ9Y285 508 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 L7N2F9 121 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 AZIN1O14977 448 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 SLC22A3O75751 556 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 TGFB1P01137 390 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 SRCP12931 536 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 TACR2P21452 398 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 VAMP2P63027 116 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 SMYD5Q6GMV2 418 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 CENPSQ8N2Z9 138 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 MMABQ96EY8 250 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 C12orf65Q9H3J6 166 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 COL5A2P05997 1499 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 CXCR1P25024 350 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 ADARP55265 1226 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 TXNDC8Q6A555 127 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 AAGABQ6PD74 315 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 PLCZ1Q86YW0 608 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 OXR1Q8N573 874 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 BEND7Q8N7W2 519 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 KCTD15Q96SI1 283 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 SIGLEC16A6NMB1 481 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 VNN2O95498 520 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 PTENP60484 403 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 GTF2H2Q13888 395 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 RNASEH2BQ5TBB1 312 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 GTF2H2CQ6P1K8 395 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 OR4C6Q8NH72 309 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 HPS1Q92902 700 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 SMIM30A4D0T7 59 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 APOC4-APOC2K7ER74 178 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 APOC2P02655 101 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ITGA5P08648 1049 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 GZMAP12544 262 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ZNF542PQ5EBM4 170 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 KREMEN2Q8NCW0 462 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 TNFAIP8L1Q8WVP5 186 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 TMEM125Q96AQ2 219 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 DUSP16Q9BY84 665 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 WDR55Q9H6Y2 383 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 A0A0J9YYE9 177 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 PLD2O14939 933 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 RPIAP49247 311 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 SMIM11AP58511 58 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 MED27Q6P2C8 311 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 SERPINA9Q86WD7 417 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ANKRD52Q8NB46 1076 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 THEM6Q8WUY1 208 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 NUS1Q96E22 293 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 PIWIL1Q96J94 861 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 MTERF1Q99551 399 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 LRTM1Q9HBL6 345 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 TMCO1Q9UM00 188 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ASTN2O75129 1339 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ZNF541Q9H0D2 1346 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ELOA3DA6NLF2 546 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 UBXN7O94888 489 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 GBAP04062 536 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 HEXBP07686 556 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 UROSP10746 265 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ELOA3BQ3SY89 546 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ARSHQ5FYA8 562 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 HMGN2P46Q86SG4 172 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ELOA2Q8IYF1 753 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ELOA3Q8NG57 546 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 PIK3R3Q92569 461 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 HAVCR1Q96D42 359 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 MTRRQ9UBK8 725 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 UNC13BO14795 1591 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 RRP1BQ14684 758 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 KIAA1161Q6NSJ0 714 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ABRAXAS1Q6UWZ7 409 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 HIF3AQ9Y2N7 669 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 CDC7O00311 574 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 SSX5O60225 188 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 RB1P06400 928 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 HLA-EP13747 358 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 PSEN1P49768 467 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ZNF143P52747 638 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 MLLT10P55197 1068 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 CDH12P55289 794 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 EVX2Q03828 476 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 PPM1JQ5JR12 505 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 GALNT18Q6P9A2 607 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ZFP3Q96NJ6 502 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms