RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TRGV8A0A0C4DH27 118 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 CCL21O00585 134 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 HBQ1P09105 142 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 ARL4AP40617 200 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 PREPP48147 710 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 DMPKQ09013 629 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 NIPAL4Q0D2K0 466 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 MAMLD1Q13495 774 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 DPYSL2Q16555 572 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 CYP2A13Q16696 494 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 HSP90AA4PQ58FG1 418 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 AGAP7PQ5VUJ5 663 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 MTFR2Q6P444 385 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 XKRXQ6PP77 449 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 OR2Y1Q8NGV0 311 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 MAML1Q92585 1016 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 PTERQ96BW5 349 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 AGAP4Q96P64 663 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 CSPG4P5Q96PW8 444 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
CLN6-212ENST00000636020 SEPT11Q9NVA2 429 aaKnown RBP17.62■□□□□ 0.41
CLN6-212ENST00000636020 MAP1AP78559 2803 aaPredicted RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 E7EQ34 232 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 C19orf84I3L1E1 186 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 EPHB6O15197 1021 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 CNOT3O75175 753 aaKnown RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 RNF8O76064 485 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 CBSLP0DN79 551 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 MTHFD1P11586 935 aaKnown RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 CDH3P22223 829 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 CBSP35520 551 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 KLK7P49862 253 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 TMEM115Q12893 351 aaPredicted RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 GALNT3Q14435 633 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 ASIC2Q16515 512 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 ACAD10Q6JQN1 1059 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 FAM83HQ6ZRV2 1179 aaPredicted RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 AMZ2Q86W34 360 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 LRRC49Q8IUZ0 686 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 TMEM151BQ8IW70 566 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 TRIM56Q9BRZ2 755 aaKnown RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 RAD18Q9NS91 495 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 IMP3Q9NV31 184 aaKnown RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 GPN3Q9UHW5 284 aaPredicted RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 POMT2Q9UKY4 750 aa17.61■□□□□ 0.41
CLN6-212ENST00000636020 CFAP20Q9Y6A4 193 aaKnown RBP17.61■□□□□ 0.41
CLN6-212ENST00000636020 AGPSO00116 658 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 UMODP07911 640 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 CD63P08962 238 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 POLR2CP19387 275 aaPredicted RBP17.6■□□□□ 0.41
CLN6-212ENST00000636020 SERPINB6P35237 376 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 KIR3DL1P43629 444 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 FOXL2P58012 376 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 SYCP1Q15431 976 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 PRAMEF13Q5VWM6 474 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 ZFPM2Q8WW38 1151 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 NR4A3Q92570 626 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 AGPAT1Q99943 283 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 TMUB1Q9BVT8 246 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 TRIM7Q9C029 511 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 SLC6A20Q9NP91 592 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 PARVAQ9NVD7 372 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 RBM22Q9NW64 420 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLN6-212ENST00000636020 SLC24A2Q9UI40 661 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 TTLL3Q9Y4R7 772 aa17.6■□□□□ 0.41
CLN6-212ENST00000636020 TMEM191CA6NGB0 347 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 POP7O75817 140 aaKnown RBP17.59■□□□□ 0.41
CLN6-212ENST00000636020 ATP1A3P13637 1013 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 PBX1P40424 430 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 CA7P43166 264 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 LMAN1P49257 510 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 PRKD1Q15139 912 aaPredicted RBP17.59■□□□□ 0.41
CLN6-212ENST00000636020 SMTNL2Q2TAL5 461 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 PLEKHA7Q6IQ23 1121 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 GFRALQ6UXV0 394 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 TMC3Q7Z5M5 1100 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 CATSPER1Q8NEC5 780 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 VPS35Q96QK1 796 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 INSM2Q96T92 566 aaPredicted RBP17.59■□□□□ 0.41
CLN6-212ENST00000636020 EPS8L2Q9H6S3 715 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 KIR3DX1Q9H7L2 352 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 MCCC2Q9HCC0 563 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 AMACRQ9UHK6 382 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 FBXL4Q9UKA2 621 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 SHOC2Q9UQ13 582 aa17.59■□□□□ 0.41
CLN6-212ENST00000636020 CACNA1CQ13936 2221 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 CCDC66A2RUB6 948 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 MATN3O15232 486 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 ATMINO43313 823 aaPredicted RBP17.58■□□□□ 0.4
CLN6-212ENST00000636020 ST6GAL1P15907 406 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 IL1R2P27930 398 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 ZNF165P49910 485 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 TLE4Q04727 773 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 XRCC4Q13426 336 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 GTF2H3Q13889 308 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 NFE2L1Q14494 772 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 CAMK4Q16566 473 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 MRPL14Q6P1L8 145 aaKnown RBP17.58■□□□□ 0.4
CLN6-212ENST00000636020 TMEM207Q6UWW9 146 aa17.58■□□□□ 0.4
CLN6-212ENST00000636020 MLKLQ8NB16 471 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms