RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 TIGD2Q4W5G0 525 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 ABHD13Q7L211 337 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 TBC1D10AQ9BXI6 508 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 TMPRSS11EQ9UL52 423 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 MID1O15344 667 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 HSD17B2P37059 387 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC1A2P43004 574 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 GRK6P43250 576 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 ALG1LQ6GMV1 187 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 PLPPR4Q7Z2D5 763 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 TNS4Q8IZW8 715 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 ANKRD52Q8NB46 1076 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 BTN2A3PQ96KV6 586 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 XKR8Q9H6D3 395 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 RGPD8O14715 1765 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 AXIN1O15169 862 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 SPAM1P38567 509 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 CPSF6Q16630 551 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 GALNT5Q7Z7M9 940 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 PQLC1Q8N2U9 271 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 CFL2Q9Y281 166 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 CABIN1Q9Y6J0 2220 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 STK16O75716 305 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 SCELO95171 688 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 GPIP06744 558 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 MC4RP32245 332 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC5A9Q2M3M2 681 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 B3GNT4Q9C0J1 378 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 TRIM64BA6NI03 449 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 PRLP01236 227 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 CYP3A4P08684 503 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 LAG3P18627 525 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 UGT1A3P35503 534 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 MATKP42679 507 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 NKD1Q969G9 470 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 RCN3Q96D15 328 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 ADAM2Q99965 735 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 TMPRSS4Q9NRS4 437 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 HPF1Q9NWY4 346 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZNF69Q9UC07 566 aa13.03□□□□□ -0.32
SYNGAP1-208ENST00000629380 FAM237BA0A1B0GVD1 139 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 TNFRSF11BO00300 401 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 AIREO43918 545 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 AGR2O95994 175 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 CRHR1P34998 444 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC25A3Q00325 362 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 RAB39AQ14964 217 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 RNASE12Q5GAN4 147 aaKnown RBP13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 USP49Q70CQ1 688 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 CMTR2Q8IYT2 770 aaKnown RBP13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 SYT17Q9BSW7 474 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 HHATLQ9HCP6 504 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 A0A0J9YYE9 177 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 TSPAN1O60635 241 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 MAPK3P27361 379 aaPredicted RBP13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 CDH13P55290 713 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 SP140Q13342 867 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 DGKZQ13574 1117 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 GHDCQ8N2G8 530 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 FAM47BQ8NA70 645 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 NINJ1Q92982 152 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 ZNF570Q96NI8 536 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC22A4Q9H015 551 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 MAP4K5Q9Y4K4 846 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 TDRD6O60522 2096 aaKnown RBP13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 A0A1B0GVM2 712 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 TCAF2A6NFQ2 919 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 NEDD8-MDP1E9PL57 170 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 H0YGN5 161 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 SMIM10L2AP0DMW4 78 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 SMIM10L2BP0DMW5 78 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 ALPPL2P10696 532 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 EPHA3P29320 983 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 MAP3K8P41279 467 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 SLC13A2Q13183 592 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 FBXO43Q4G163 708 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 PCDH19Q8TAB3 1148 aa13.02□□□□□ -0.32
SYNGAP1-208ENST00000629380 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 RPP40O75818 363 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 PRAMEF1O95521 474 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 PRNPP04156 253 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 FAM86B2P0C5J1 330 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 STRADAQ7RTN6 431 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 SLC22A17Q8WUG5 538 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 MAGEE1Q9HCI5 957 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 LYARQ9NX58 379 aaKnown RBP13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 ELOVL7A1L3X0 281 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 ADAMTS3O15072 1205 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 ZBTB22O15209 634 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 CLDN11O75508 207 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 CALCAP01258 141 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 CYP4F8P98187 520 aa13.02□□□□□ -0.33
SYNGAP1-208ENST00000629380 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms