RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 USP9XQ93008 2570 aaPredicted RBP18.5■□□□□ 0.55
SMN2-215ENST00000628696 MGAT4DA6NG13 374 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 DDX3YO15523 660 aaKnown RBP18.5■□□□□ 0.55
SMN2-215ENST00000628696 ZBTB11O95625 1053 aaPredicted RBP18.5■□□□□ 0.55
SMN2-215ENST00000628696 POLBP06746 335 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 KLK3P07288 261 aaPredicted RBP18.5■□□□□ 0.55
SMN2-215ENST00000628696 TPM1P09493 284 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 HLA-DPA1P20036 260 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 GNLYP22749 145 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 IL10RAQ13651 578 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 TRIM14Q14142 442 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 KRT33BQ14525 404 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 NADK2Q4G0N4 442 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 SPOCD1Q6ZMY3 1216 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 SPDYE1Q8NFV5 336 aaPredicted RBP18.5■□□□□ 0.55
SMN2-215ENST00000628696 PPM1MQ96MI6 270 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 FSD1LQ9BXM9 530 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 ING2Q9H160 280 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 CHST8Q9H2A9 424 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 RSPH14Q9UHP6 348 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 SLC24A2Q9UI40 661 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 ACSL5Q9ULC5 683 aa18.5■□□□□ 0.55
SMN2-215ENST00000628696 SPTAN1Q13813 2472 aaKnown RBP18.5■□□□□ 0.55
SMN2-215ENST00000628696 ESPL1Q14674 2120 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 GAPDHSO14556 408 aaPredicted RBP18.49■□□□□ 0.55
SMN2-215ENST00000628696 AGFG2O95081 481 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 PRAMEF1O95521 474 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 AGTP01019 485 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 SLC35G4P0C7Q5 338 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 POLR2CP19387 275 aaPredicted RBP18.49■□□□□ 0.55
SMN2-215ENST00000628696 KPNA2P52292 529 aaKnown RBP18.49■□□□□ 0.55
SMN2-215ENST00000628696 ADCY2Q08462 1091 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 GPS2Q13227 327 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 MPP3Q13368 585 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 TAZQ16635 292 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 FHL5Q5TD97 284 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 PRAMEF17Q5VTA0 474 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 ZNF501Q96CX3 271 aaPredicted RBP18.49■□□□□ 0.55
SMN2-215ENST00000628696 VAT1Q99536 393 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 ASB8Q9H765 288 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 ARL5AQ9Y689 179 aa18.49■□□□□ 0.55
SMN2-215ENST00000628696 SEC16AO15027 2179 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 CDH3P22223 829 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 PTGIRP43119 386 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 PRKAA1Q13131 559 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 HIST2H2BCQ6DN03 193 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 CCDC50Q8IVM0 306 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 CFAP206Q8IYR0 622 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 SLC38A9Q8NBW4 561 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 GALNT11Q8NCW6 608 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 OR4E2Q8NGC2 313 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 OR2L2Q8NH16 312 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 OR8K5Q8NH50 307 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 ZFPM2Q8WW38 1151 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 CLIP3Q96DZ5 547 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 FICDQ9BVA6 458 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 TLR10Q9BXR5 811 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 KIR3DX1Q9H7L2 352 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 FANCEQ9HB96 536 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 ABHD10Q9NUJ1 306 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 SMOXQ9NWM0 555 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 COLEC10Q9Y6Z7 277 aa18.48■□□□□ 0.55
SMN2-215ENST00000628696 SPENQ96T58 3664 aaKnown RBP18.47■□□□□ 0.55
SMN2-215ENST00000628696 UTP20O75691 2785 aaKnown RBP18.47■□□□□ 0.55
SMN2-215ENST00000628696 SLC9B1P1A6NJY1 282 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 C2orf81A6NN90 581 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 CBFA2T2O43439 604 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 PSTPIP1O43586 416 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 LPOP22079 712 aaPredicted RBP18.47■□□□□ 0.55
SMN2-215ENST00000628696 LAMB3Q13751 1172 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 TFDP3Q5H9I0 405 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 CAPRIN2Q6IMN6 1127 aaKnown RBP18.47■□□□□ 0.55
SMN2-215ENST00000628696 LCN10Q6JVE6 187 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 DAAM2Q86T65 1068 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 LURAP1LQ8IV03 231 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 ENDOVQ8N8Q3 282 aaKnown RBP18.47■□□□□ 0.55
SMN2-215ENST00000628696 OR4K2Q8NGD2 314 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 DCUN1D1Q96GG9 259 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 RMDN2Q96LZ7 410 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 QKIQ96PU8 341 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMN2-215ENST00000628696 C10orf88Q9H8K7 445 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 FKBPLQ9UIM3 349 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 TRHDEQ9UKU6 1024 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 SNX7Q9UNH6 387 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 PCDHGA9Q9Y5G4 932 aaKnown RBP18.47■□□□□ 0.55
SMN2-215ENST00000628696 SHANK1Q9Y566 2161 aa18.47■□□□□ 0.55
SMN2-215ENST00000628696 H7C0C1 242 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 MEN1O00255 615 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 SRP72O76094 671 aaKnown RBP18.46■□□□□ 0.55
SMN2-215ENST00000628696 ZRANB2O95218 330 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMN2-215ENST00000628696 LCA5LO95447 670 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 NDUFS1P28331 727 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 ATP5OP48047 213 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 GSDMDP57764 484 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 PLEKHS1Q5SXH7 462 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 FAM69BQ5VUD6 431 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 IZUMO3Q5VZ72 239 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 LILRA3Q8N6C8 439 aaPredicted RBP18.46■□□□□ 0.55
SMN2-215ENST00000628696 CPT1BQ92523 772 aa18.46■□□□□ 0.55
SMN2-215ENST00000628696 FERD3LQ96RJ6 166 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms