RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 CLDN19Q8N6F1 224 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 KDF1Q8NAX2 398 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 KIF18AQ8NI77 898 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 ERP44Q9BS26 406 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 TMEM121BQ9BXQ6 578 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 B3GNT4Q9C0J1 378 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 RAB33BQ9H082 229 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 MVB12BQ9H7P6 319 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 WHRNQ9P202 907 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 ZNF624Q9P2J8 865 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 ENTPD2Q9Y5L3 495 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 COMMD10Q9Y6G5 202 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 OR51F1A6NGY5 319 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 MATN2O00339 956 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 AVILO75366 819 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 URI1O94763 535 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 UBXN7O94888 489 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 IVDP26440 423 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 CD1CP29017 333 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 CA5AP35218 305 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 LIMK2P53671 638 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 TERF1P54274 439 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 ERVPABLB-1P60509 514 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 CBLBQ13191 982 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 CAPRIN2Q6IMN6 1127 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 HIBCHQ6NVY1 386 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 SLITRK4Q8IW52 837 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 SFTPA2Q8IWL1 248 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 CARFQ8N187 725 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 ELMO1Q92556 727 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 SIGLEC10Q96LC7 697 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 C12orf66Q96MD2 445 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 ZNF578Q96N58 590 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 EBNA1BP2Q99848 306 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 PHACTR1Q9C0D0 580 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 WWP1Q9H0M0 922 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 CCDC68Q9H2F9 335 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 THSD1Q9NS62 852 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 IMP3Q9NV31 184 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 AK5Q9Y6K8 562 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
SNRPA1-216ENST00000626000 TRBV23OR9-2A0A075B6M9 112 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 OR52A4PA6NMU1 304 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 PLD2O14939 933 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 AMD1P17707 334 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 ARNTP27540 789 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 ARCN1P48444 511 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 GABREP78334 506 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 CLCA4Q14CN2 919 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 PLCL1Q15111 1095 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 PHF19Q5T6S3 580 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 FAM83HQ6ZRV2 1179 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 KIAA0408Q6ZU52 694 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 CEP128Q6ZU80 1094 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 CENPUQ71F23 418 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 RAB11FIP2Q7L804 512 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 PDZD3Q86UT5 571 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 CILP2Q8IUL8 1156 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 AGBL5Q8NDL9 886 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 ACVR1CQ8NER5 493 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 CCDC97Q96F63 343 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 ZDHHC12Q96GR4 267 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 ATXN7L3BQ96GX2 97 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 CD180Q99467 661 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 FOXP3Q9BZS1 431 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 KIR3DX1Q9H7L2 352 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 C20orf96Q9NUD7 363 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 SCHIP1Q9P0W5 487 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 PDP2Q9P2J9 529 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 EPHA6Q9UF33 1036 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 POLG2Q9UHN1 485 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 PSMD13Q9UNM6 376 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 WDR37Q9Y2I8 494 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 CHD8Q9HCK8 2581 aa13.69□□□□□ -0.22
SNRPA1-216ENST00000626000 MN1Q10571 1320 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ZCWPW2A0A1B0GU75 182 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 UBA6A0AVT1 1052 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 C1QTNF9BB2RNN3 333 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 EIF3HO15372 352 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ITGA2BP08514 1039 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ANKRD34CP0C6C1 535 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 C1QTNF9P0C862 333 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 JMJD7P0C870 316 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 PRSS56P0CW18 603 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 THRAP10827 490 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 CSTF2P33240 577 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 MAPK9P45984 424 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 CAPZBP47756 277 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 PDX1P52945 283 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ITGA8P53708 1063 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 BOP1Q14137 746 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 GPR18Q14330 331 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms